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Aliases for LINC02182 Gene
Subcategory (RNA class) for LINC02182 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LINC02182 Gene
External Ids for LINC02182 Gene
- HGNC: 53044
- Entrez Gene: 101928880
- Ensembl: ENSG00000260420
Previous GeneCards Identifiers for LINC02182 Gene
- GC16P088194
Summaries for LINC02182 Gene
GeneCards Summary for LINC02182 Gene
LINC02182 (Long Intergenic Non-Protein Coding RNA 2182) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC02182 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02182 Gene
Genomics for LINC02182 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC02182 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH16J088185 | Enhancer | 0.7 | ENCODE CraniofacialAtlas dbSUPER | 600.7 | +0.3 | 264 | 2.2 | MNT BHLHE40 | ENSG00000261327 LINC02182 ENSG00000260162 LOC107984862 LOC105369246 | |
| GH16J088193 | Enhancer | 1.2 | Ensembl ENCODE CraniofacialAtlas dbSUPER | 0.4 | +8.2 | 8237 | 1.8 | CREB1 CTCF ZNF629 REST CEBPA RAD21 CTBP1 ZNF444 SMC3 BHLHE40 | ENSG00000261816 LINC02182 piR-53730 LOC107984862 LOC105369246 | |
| GH16J088189 | Enhancer | 0.3 | Ensembl dbSUPER | 0.7 | +3.7 | 3696 | 1.8 | ENSG00000261327 LINC02182 lnc-BANP-9 LOC107984862 LOC105369246 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC02182 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC02182 Gene
Genomic Locations for LINC02182 Gene
- chr16:88,186,605-88,195,220
- (GRCh38/hg38)
- Size:
- 8,616 bases
- Orientation:
- Plus strand
- chr16:88,227,920-88,228,823
- (GRCh37/hg19)
- Size:
- 904 bases
- Orientation:
- Plus strand
Genomic View for LINC02182 Gene
Genes around LINC02182 on UCSC Golden Path with GeneCards custom track
LINC02182 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 16q24.2 by HGNC
- 16q24.2 by Entrez Gene
- 16q24.2 by Ensembl
LINC02182 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC02182 Gene
Proteins for LINC02182 Gene
Post-translational modifications for LINC02182 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02182
- Origene Custom Protein Services for LINC02182
No data available for DME Specific Peptides for LINC02182 Gene
Domains & Families for LINC02182 Gene
Gene Families for LINC02182 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02182 Gene
Function for LINC02182 Gene
Phenotypes From GWAS Catalog for LINC02182 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LINC02182
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02182 Gene
Localization for LINC02182 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02182 Gene
Transcripts for LINC02182 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02182 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS000075D300_9606 | lncRNA | 498 | 2 |
HGNC: 53044, RefSeq: NR_110944, |
| URS00007676A1_9606 | lncRNA | 498 | 2 |
Ensembl: ENST00000569362 (view in UCSC) , LNCipedia: LINC02182:7, |
| URS0000EF2C6B_9606 | lncRNA | 401 | 1 |
Ensembl: ENST00000665557 (view in UCSC) , |
| URS00008BA7A1_9606 | lncRNA | 512 | 3 |
LncBook: HSALNT0235245, LNCipedia: LINC02182:6, NONCODE: NONHSAT144376.2, |
| URS00008B5B25_9606 | lncRNA | 446 | 3 |
LncBook: HSALNT0235251, LNCipedia: LINC02182:9, NONCODE: NONHSAT144377.2, |
LINC02182 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LINC02182 Gene
- 2 NCBI additional mRNA sequence :
CRISPR Products
- Browse CRISPR knockouts for LINC02182
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LINC02182 Gene
- GeneLoc Exon Structure for
- LINC02182
Expression for LINC02182 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02182
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02182 Gene
Orthologs for LINC02182 Gene
No data available for Orthologs for LINC02182 Gene
Paralogs for LINC02182 Gene
No data available for Paralogs for LINC02182 Gene
Variants for LINC02182 Gene
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv3582434 | CNV | loss | 25503493 |
| nsv1058465 | CNV | gain | 25217958 |
| nsv978177 | CNV | duplication | 23825009 |
Additional Variant Information for LINC02182 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC02182
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC02182 Gene
Disorders for LINC02182 Gene
Additional Disease Information for LINC02182
No disorders were found for LINC02182 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02182 Gene
Publications for LINC02182 Gene
No publications were found for LINC02182 Gene.
No data available for Mastermind for LINC02182 Gene
Products for LINC02182 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02182
- Origene Custom Protein Services for LINC02182
- Browse OriGene Inhibitory RNA Products For LINC02182
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC02182
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC02182
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC02182
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC02182
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC02182
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC02182
Sources for LINC02182 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB