LINC02176 Gene (RNA Gene)

Long Intergenic Non-Protein Coding RNA 2176

GC16P084929
GIFtS:
6

Aliases for LINC02176 Gene

Subcategory (RNA class) for LINC02176 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for LINC02176 Gene

  • Long Intergenic Non-Protein Coding RNA 2176 2 3 5
  • LINC02176 2 170
  • HSALNG0113168 169
  • NONHSAG020174 94

External Ids for LINC02176 Gene

Summaries for LINC02176 Gene

GeneCards Summary for LINC02176 Gene

LINC02176 (Long Intergenic Non-Protein Coding RNA 2176) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02176 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02176 Gene

Genomics for LINC02176 Gene

GeneHancer (GH) Regulatory Elements for LINC02176 Gene

Promoters and enhancers for LINC02176 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02176 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02176 Gene

Genomic Locations for LINC02176 Gene
chr16:84,928,220-84,943,056
(GRCh38/hg38)
Size:
14,837 bases
Orientation:
Plus strand
chr16:84,961,959-84,973,209
(GRCh37/hg19)
Size:
11,251 bases
Orientation:
Plus strand

Genomic View for LINC02176 Gene

Genes around LINC02176 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02176 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02176 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LINC02176 Gene

Proteins for LINC02176 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LINC02176 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02176 Gene

Domains & Families for LINC02176 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02176 Gene

Function for LINC02176 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LINC02176 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02176 Gene

Localization for LINC02176 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02176 Gene

Pathways & Interactions for LINC02176 Gene

PathCards logo

SuperPathways for LINC02176 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02176 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02176 Gene

Drugs & Compounds for LINC02176 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LINC02176 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for LINC02176 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(2) LncBook transcripts :
(2) LNCipedia transcripts :
(3) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02176 Gene

No ASD Table

Relevant External Links for LINC02176 Gene

GeneLoc Exon Structure for
LINC02176
ECgene alternative splicing isoforms for
LINC02176

Expression for LINC02176 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02176 Gene

Orthologs for LINC02176 Gene

Evolution for LINC02176 Gene

ENSEMBL:
Gene Tree for LINC02176 (if available)
TreeFam:
Gene Tree for LINC02176 (if available)

No data available for Orthologs for LINC02176 Gene

Paralogs for LINC02176 Gene

No data available for Paralogs for LINC02176 Gene

Variants for LINC02176 Gene

Sequence variations from dbSNP and Humsavar for LINC02176 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000173094 -- 84,942,249(+) G/A genic_downstream_transcript_variant, intron_variant
rs1000227495 -- 84,939,857(+) G/A downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant
rs1000263242 -- 84,926,669(+) T/C upstream_transcript_variant
rs1000287106 -- 84,937,397(+) G/T genic_upstream_transcript_variant, intron_variant
rs1000468765 -- 84,935,190(+) G/A genic_upstream_transcript_variant, intron_variant

Additional Variant Information for LINC02176 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02176

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02176 Gene

Disorders for LINC02176 Gene

No disorders were found for LINC02176 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02176 Gene

Publications for LINC02176 Gene

No publications were found for LINC02176 Gene.

No data available for External Links for LINC02176 Gene

Products for LINC02176 Gene

Sources for LINC02176 Gene