Aliases for LINC02174 Gene

Subcategory (RNA class) for LINC02174 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02174 Gene

  • Long Intergenic Non-Protein Coding RNA 2174 2 3 5
  • LINC02174 2 168
  • NONHSAG039329 92
  • HSALNG0038554 167

External Ids for LINC02174 Gene

Previous GeneCards Identifiers for LINC02174 Gene

  • GC04M171606

Summaries for LINC02174 Gene

GeneCards Summary for LINC02174 Gene

LINC02174 (Long Intergenic Non-Protein Coding RNA 2174) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02174 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02174 Gene

Genomics for LINC02174 Gene

GeneHancer (GH) Regulatory Elements for LINC02174 Gene

Promoters and enhancers for LINC02174 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J171644 Enhancer 0.6 ENCODE 0.4 +12.0 11954 0.2 EP300 BCL11A ASH2L ELF1 POU2F2 EBF1 IKZF1 EZH2 NFATC3 TBX21 LINC02174 ENSG00000251176
GH04J171629 Enhancer 0.7 Ensembl 0.3 +27.4 27418 0.4 EP300 MEF2C BCL11A ZNF316 MEF2B STAT5A NFATC3 ATF2 TBX21 JUNB LINC02174 ENSG00000251176
GH04J171636 Enhancer 0.3 Ensembl 0.4 +20.1 20118 0.2 FOS LINC02174 ENSG00000251176
GH04J171551 Enhancer 0.3 Ensembl 0.1 +105.2 105218 0.4 ZNF316 NFE2 ENSG00000251176 ENSG00000287210 LINC02174
GH04J171587 Enhancer 0.2 Ensembl 0.2 +68.7 68718 0.2 ENSG00000251176 LINC02174
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02174 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02174 Gene

Genomic Locations for LINC02174 Gene
chr4:171,536,034-171,656,819
(GRCh38/hg38)
Size:
120,786 bases
Orientation:
Minus strand
chr4:172,523,834-172,559,914
(GRCh37/hg19)
Size:
36,081 bases
Orientation:
Minus strand

Genomic View for LINC02174 Gene

Genes around LINC02174 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02174 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02174 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02174 Gene

Proteins for LINC02174 Gene

Post-translational modifications for LINC02174 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02174 Gene

Domains & Families for LINC02174 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02174 Gene

Function for LINC02174 Gene

Phenotypes From GWAS Catalog for LINC02174 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02174 Gene

Localization for LINC02174 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02174 Gene

Pathways & Interactions for LINC02174 Gene

PathCards logo

SuperPathways for LINC02174 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02174 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02174 Gene

Drugs & Compounds for LINC02174 Gene

No Compound Related Data Available

Transcripts for LINC02174 Gene

mRNA/cDNA for LINC02174 Gene

4 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
3 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02174 Gene

No ASD Table

Relevant External Links for LINC02174 Gene

GeneLoc Exon Structure for
LINC02174

Expression for LINC02174 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02174 Gene

Orthologs for LINC02174 Gene

Evolution for LINC02174 Gene

ENSEMBL:
Gene Tree for LINC02174 (if available)
TreeFam:
Gene Tree for LINC02174 (if available)

No data available for Orthologs for LINC02174 Gene

Paralogs for LINC02174 Gene

No data available for Paralogs for LINC02174 Gene

Variants for LINC02174 Gene

Additional dbSNP identifiers (rs#s) for LINC02174 Gene

Additional Variant Information for LINC02174 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02174

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02174 Gene

Disorders for LINC02174 Gene

Additional Disease Information for LINC02174

No disorders were found for LINC02174 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02174 Gene

Publications for LINC02174 Gene

No publications were found for LINC02174 Gene.

Products for LINC02174 Gene

Sources for LINC02174 Gene