Aliases for LINC02168 Gene

Subcategory (RNA class) for LINC02168 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02168 Gene

  • Long Intergenic Non-Protein Coding RNA 2168 2 3 5
  • LINC02168 2 168
  • NONHSAG019433 92
  • HSALNG0111365 167

External Ids for LINC02168 Gene

Summaries for LINC02168 Gene

GeneCards Summary for LINC02168 Gene

LINC02168 (Long Intergenic Non-Protein Coding RNA 2168) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02168 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02168 Gene

Genomics for LINC02168 Gene

GeneHancer (GH) Regulatory Elements for LINC02168 Gene

Promoters and enhancers for LINC02168 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J050805 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 500.7 +1.1 1075 1.4 ZNF217 CTCF TEAD4 TRIM28 TARDBP REST ZBTB25 TGIF2 RAD21 CTBP1 LOC105371251 LINC02168 BRD7 ENSG00000261644 RF00017-2070
GH16J050804 Enhancer 1 Ensembl CraniofacialAtlas 500.7 -0.9 -894 0.5 POLR2G NCOR1 KDM6A ZBTB25 SKI TEAD1 TBX3 SIN3A FOXA2 TBP ENSG00000260616 LOC105371251 LINC02168 BRD7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02168 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02168 Gene

Genomic Locations for LINC02168 Gene
chr16:50,805,440-50,807,932
(GRCh38/hg38)
Size:
2,493 bases
Orientation:
Plus strand
chr16:50,840,579-50,841,540
(GRCh37/hg19)
Size:
962 bases
Orientation:
Plus strand

Genomic View for LINC02168 Gene

Genes around LINC02168 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02168 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02168 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02168 Gene

Proteins for LINC02168 Gene

Post-translational modifications for LINC02168 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02168 Gene

Domains & Families for LINC02168 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02168 Gene

Function for LINC02168 Gene

Phenotypes From GWAS Catalog for LINC02168 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02168 Gene

Localization for LINC02168 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02168 Gene

Pathways & Interactions for LINC02168 Gene

PathCards logo

SuperPathways for LINC02168 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02168 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02168 Gene

Drugs & Compounds for LINC02168 Gene

No Compound Related Data Available

Transcripts for LINC02168 Gene

mRNA/cDNA for LINC02168 Gene

4 RNACentral transcripts :
1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
3 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02168 Gene

No ASD Table

Relevant External Links for LINC02168 Gene

GeneLoc Exon Structure for
LINC02168

Expression for LINC02168 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02168

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02168 Gene

Orthologs for LINC02168 Gene

Evolution for LINC02168 Gene

ENSEMBL:
Gene Tree for LINC02168 (if available)
TreeFam:
Gene Tree for LINC02168 (if available)

No data available for Orthologs for LINC02168 Gene

Paralogs for LINC02168 Gene

No data available for Paralogs for LINC02168 Gene

Variants for LINC02168 Gene

Additional dbSNP identifiers (rs#s) for LINC02168 Gene

Additional Variant Information for LINC02168 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02168

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02168 Gene

Disorders for LINC02168 Gene

Additional Disease Information for LINC02168

No disorders were found for LINC02168 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02168 Gene

Publications for LINC02168 Gene

No publications were found for LINC02168 Gene.

No data available for Mastermind for LINC02168 Gene

Products for LINC02168 Gene

Sources for LINC02168 Gene