Aliases for LINC02166 Gene
Subcategory (RNA class) for LINC02166 Gene
non-coding RNA
Quality Score for this RNA gene is
3
External Ids for LINC02166 Gene
- HGNC: 53027
- Entrez Gene: 105371416
- Ensembl: ENSG00000260259
Summaries for LINC02166 Gene
GeneCards Summary for LINC02166 Gene
LINC02166 (Long Intergenic Non-Protein Coding RNA 2166) is an RNA Gene, and is affiliated with the non-coding RNA class.
Additional gene information for LINC02166 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02166 Gene
Genomics for LINC02166 Gene
GeneHancer (GH) Regulatory Elements for LINC02166 Gene
Promoters and enhancers for LINC02166 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH16I089686 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE | 560.7 | -0.7 | -742 | 2.5 | PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B ZNF207 | CDK10 LINC02166 DPEP1 VPS9D1 ZNF276 FANCA PIR59284 | |
| GH16I088766 | Enhancer | 1.8 | FANTOM5 Ensembl ENCODE dbSUPER | 4.3 | +915.4 | 915440 | 8.5 | HDGF PKNOX1 CLOCK SMAD1 ARNT ARID4B NEUROD1 SIN3A FEZF1 ZNF2 | PIEZO1 APRT RNF166 VPS9D1-AS1 LINC02166 LOC339059 | |
| GH16I089696 | Enhancer | 0.6 | ENCODE | 11.2 | -10.3 | -10343 | 0.8 | SCRT1 KLF1 NR2F1 SMARCB1 HIC1 POLR2A GLIS1 SCRT2 RUNX3 SUPT5H | PIR59284 CDK10 LINC02166 SPATA2L | |
| GH16I089688 | Enhancer | 0.6 | ENCODE | 0.8 | -2.1 | -2099 | 0.2 | SOX5 ZNF792 TEAD1 HLF THRB TEAD3 NFIL3 CEBPA KDM1A | CHMP1A LINC02166 PIR59284 CDK10 | |
| GH16I089694 | Enhancer | 0.7 | ENCODE | 0.4 | -8.9 | -8946 | 1.1 | TFAP4 KLF1 SAP130 ZFP64 DMAP1 POLR2A NR2F6 ZNF600 KLF8 ZNF3 | CDK10 PIR59284 LINC02166 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around LINC02166 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for LINC02166 Gene
Genomic Locations for LINC02166 Gene
- chr16:89,682,507-89,686,569
- (GRCh38/hg38)
- Size:
- 4,063 bases
- Orientation:
- Minus strand
- chr16:89,749,028-89,752,977
- (GRCh37/hg19)
Genomic View for LINC02166 Gene
Genes around LINC02166 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 16q24.3 by Ensembl
- 16q24.3 by Entrez Gene
- 16q24.3 by HGNC
LINC02166 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC02166 Gene
Proteins for LINC02166 Gene
Post-translational modifications for LINC02166 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for LINC02166
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02166
- Origene Custom Protein Services for LINC02166
- Search GeneTex for Proteins for LINC02166
No data available for DME Specific Peptides for LINC02166 Gene
Domains & Families for LINC02166 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02166 Gene
Function for LINC02166 Gene
Phenotypes From GWAS Catalog for LINC02166 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC02166
-
- Search ViGene Biosciences for LINC02166
CRISPR Products
- Browse CRISPR knockouts for LINC02166
miRNA Products
- Search ViGene Biosciences for LINC02166
Inhibitory RNA Products
- Search ViGene Biosciences for LINC02166
Clone Products
- GenScript: Custom all cDNA clones Services for LINC02166
- VectorBuilder custom plasmid, inducible vectors for LINC02166
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC02166
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02166 Gene
Localization for LINC02166 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02166 Gene
Transcripts for LINC02166 Gene
mRNA/cDNA for LINC02166 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for LINC02166
miRNA Products
- Search ViGene Biosciences for LINC02166
Inhibitory RNA Products
- Search ViGene Biosciences for LINC02166
Clone Products
- GenScript: Custom all cDNA clones Services for LINC02166
- VectorBuilder custom plasmid, inducible vectors for LINC02166
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC02166
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for LINC02166 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02166 Gene
Orthologs for LINC02166 Gene
No data available for Orthologs for LINC02166 Gene
Paralogs for LINC02166 Gene
No data available for Paralogs for LINC02166 Gene
Variants for LINC02166 Gene
| SNP ID | Clin | Chr 16 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000199180 | -- | 89,687,994(-) | T/C | upstream_transcript_variant | |
| rs1000406312 | -- | 89,684,761(-) | A/C | intron_variant | |
| rs1000426325 | -- | 89,686,656(-) | G/A | upstream_transcript_variant | |
| rs1000430277 | -- | 89,683,681(-) | C/A | intron_variant | |
| rs1000882085 | -- | 89,686,484(-) | C/A | non_coding_transcript_variant |
Additional Variant Information for LINC02166 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC02166
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02166 Gene
Disorders for LINC02166 Gene
No disorders were found for LINC02166 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02166 Gene
Publications for LINC02166 Gene
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
Products for LINC02166 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02166
- Origene Custom Protein Services for LINC02166
- Browse OriGene Inhibitory RNA Products For LINC02166
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC02166
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC02166
- GenScript: Custom all cDNA clones Services for LINC02166
- GenScript Custom Purified and Recombinant Proteins Services for LINC02166
- GenScript Custom Assay Services for LINC02166
- GenScript Custom overexpressing Cell Line Services for LINC02166
- Browse GenScript CRISPR for LINC02166
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for LINC02166
- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Browse Antibodies at Cloud-Clone Corp.
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- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC02166
- VectorBuilder custom plasmid, inducible vectors for LINC02166
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC02166
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for LINC02166
- Search GeneTex for Proteins for LINC02166
- Search ViGene Biosciences for LINC02166
Sources for LINC02166 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
