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LINC02154 (Long Intergenic Non-Protein Coding RNA 2154) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC02154 include Esophageal Cancer.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH0XJ013303 | Promoter/Enhancer | 0.8 | EPDnew Ensembl | 609.6 | -1.5 | -1548 | 3.6 | SOX6 FOSL1 MNT SPI1 POLR2A | LINC02154 GS1-600G8.3 ATXN3L lnc-ATXN3L-4 RF00017-8164 FAM9C | |
GH0XJ013282 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE | 6.5 | +17.9 | 17939 | 6.6 | TEAD4 LEF1 IKZF1 JUND POLR2A DPF2 SOX6 TCF12 EP300 HMBOX1 | LINC02154 lnc-EGFL6-12 lnc-TMSB4X-9 ATXN3L lnc-TMSB4X-7 RF00017-8164 FAM9C | |
GH0XJ013372 | Enhancer | 0.8 | Ensembl ENCODE dbSUPER | 5.4 | -69.5 | -69547 | 4 | JUND NFE2 FOS MAFG ATF2 NFE2L2 EMSY | LINC02154 LOC105373137 GPX1P1 LINC01203 ATXN3L EGFL6 | |
GH0XJ013368 | Enhancer | 0.6 | Ensembl dbSUPER | 7.6 | -65.6 | -65648 | 2.2 | FOXA2 GATA3 FOXA1 ATF7 | LOC105373137 LINC02154 GPX1P1 LINC01203 ATXN3L EGFL6 | |
GH0XJ013344 | Enhancer | 0.5 | Ensembl | 7.1 | -41.9 | -41948 | 2.4 | RELA RELB GATAD2B IKZF1 NR2F1 MTA2 ZNF687 IKZF2 | LINC02154 RF00017-8164 piR-32214-703 LINC01203 ATXN3L EGFL6 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000047B8CD_9606 | lncRNA | 1497 | 3 |
Ensembl: ENST00000412485 (view in UCSC) , LNCipedia: LINC02154:7, NONCODE: NONHSAT136291.2, |
URS00000AF62D_9606 | lncRNA | 927 | 3 |
Ensembl: ENST00000443965 (view in UCSC) , LNCipedia: LINC02154:5, NONCODE: NONHSAT136293.2, |
URS0000BC43DC_9606 | lncRNA | 1421 | 2 |
HGNC: 53015, RefSeq: NR_146309, |
URS0000EF3C1B_9606 | lncRNA | 1387 | 1 |
Ensembl: ENST00000670053 (view in UCSC) , |
URS00008BB0AC_9606 | lncRNA | 2410 | 2 |
LNCipedia: LINC02154:6, NONCODE: NONHSAT136290.2, |
Disorder | Aliases | PubMed IDs |
---|---|---|
esophageal cancer |
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