Aliases for LINC02131 Gene

Subcategory (RNA class) for LINC02131 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02131 Gene

  • Long Intergenic Non-Protein Coding RNA 2131 2 3 5
  • LINC02131 2 168
  • NONHSAG020043 92
  • HSALNG0112838 167

External Ids for LINC02131 Gene

Summaries for LINC02131 Gene

GeneCards Summary for LINC02131 Gene

LINC02131 (Long Intergenic Non-Protein Coding RNA 2131) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02131 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02131 Gene

Genomics for LINC02131 Gene

GeneHancer (GH) Regulatory Elements for LINC02131 Gene

Promoters and enhancers for LINC02131 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J077589 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.8 2819 9.2 ZSCAN5C ZNF639 ZIC2 TCF7 KLF7 OSR2 WT1 SP2 TCF7L2 ZNF76 SYCE1L LINC02131 L13712-008 ENSG00000278862
GH16J077584 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.3 -5281 5.8 CTCF TCF12 REST RAD21 TRIM22 SMC3 RBM25 CEBPG FOS FOSL2 ADAMTS18 SYCE1L L13712-008 LINC02131
GH16J077600 Enhancer 0.6 Ensembl dbSUPER 0.4 +8.9 8919 0.2 CTCF XRCC5 TRIM22 LINC02131 L13712-008 ENSG00000278862
GH16J077603 Enhancer 0.6 Ensembl 0.4 +12.9 12919 0.6 ZNF217 CUX1 CTBP1 MBD2 FOXA1 PKNOX1 DPF2 GATA3 TCF7L2 MTA1 LINC02131 L13712-008 ENSG00000278862
GH16J077617 Enhancer 0.6 Ensembl 0.3 +27.2 27219 1.2 TRIM28 OSR2 WT1 REST FOS ZNF843 TAF1 GATA2 MAX ZNF350 LINC02131 ENSG00000278862 L13712-008
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02131 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02131 Gene

Genomic Locations for LINC02131 Gene
chr16:77,590,782-77,626,235
(GRCh38/hg38)
Size:
35,454 bases
Orientation:
Plus strand
chr16:77,624,703-77,644,578
(GRCh37/hg19)
Size:
19,876 bases
Orientation:
Plus strand

Genomic View for LINC02131 Gene

Genes around LINC02131 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02131 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02131 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02131 Gene

Proteins for LINC02131 Gene

Post-translational modifications for LINC02131 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02131 Gene

Domains & Families for LINC02131 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02131 Gene

Function for LINC02131 Gene

Phenotypes From GWAS Catalog for LINC02131 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02131 Gene

Localization for LINC02131 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02131 Gene

Pathways & Interactions for LINC02131 Gene

PathCards logo

SuperPathways for LINC02131 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02131 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02131 Gene

Drugs & Compounds for LINC02131 Gene

No Compound Related Data Available

Transcripts for LINC02131 Gene

mRNA/cDNA for LINC02131 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02131 Gene

No ASD Table

Relevant External Links for LINC02131 Gene

GeneLoc Exon Structure for
LINC02131

Expression for LINC02131 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02131 Gene

Orthologs for LINC02131 Gene

Evolution for LINC02131 Gene

ENSEMBL:
Gene Tree for LINC02131 (if available)
TreeFam:
Gene Tree for LINC02131 (if available)

No data available for Orthologs for LINC02131 Gene

Paralogs for LINC02131 Gene

No data available for Paralogs for LINC02131 Gene

Variants for LINC02131 Gene

Additional dbSNP identifiers (rs#s) for LINC02131 Gene

Additional Variant Information for LINC02131 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02131

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02131 Gene

Disorders for LINC02131 Gene

No disorders were found for LINC02131 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02131 Gene

Publications for LINC02131 Gene

No publications were found for LINC02131 Gene.

No data available for Mastermind for LINC02131 Gene

Products for LINC02131 Gene

Sources for LINC02131 Gene