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Aliases for LINC02129 Gene

Subcategory (RNA class) for LINC02129 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02129 Gene

  • Long Intergenic Non-Protein Coding RNA 2129 2 3 5

External Ids for LINC02129 Gene

Summaries for LINC02129 Gene

GeneCards Summary for LINC02129 Gene

LINC02129 (Long Intergenic Non-Protein Coding RNA 2129) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02129 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02129 Gene

Genomics for LINC02129 Gene

GeneHancer (GH) Regulatory Elements for LINC02129 Gene

Promoters and enhancers for LINC02129 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J027176 Enhancer 1.1 Ensembl ENCODE 600.7 -1.8 -1787 4.1 CC2D1A ELF3 CTCF MAFK SP1 ZNF384 ZNF644 RAD21 KAT8 IKZF1 LINC02129 PIR46766
GH16J027174 Enhancer 0.5 ENCODE 600.7 +1.6 1602 0.2 CREB1 CTBP1 CEBPB RCOR1 RFX5 ATF7 LINC02129 KDM8 LOC105371155
GH16J027169 Enhancer 1 FANTOM5 ENCODE 0.4 +6.7 6678 0.8 CTCF CREB1 ZIC2 HDAC1 CBFB RNF2 RUNX3 HDAC2 FOXA2 RAD21 KDM8 IL21R KIAA0556 LINC02129 LOC105371155
GH16J027173 Enhancer 0.6 ENCODE 0.7 +2.6 2622 1.4 CBFA2T2 TRIM24 PKNOX1 GATA3 TCF12 TAL1 KLF16 TEAD4 CBFA2T3 KDM8 LINC02129 LOC105371155
GH16J027181 Enhancer 0.5 FANTOM5 0.7 -4.7 -4716 0.2 RAD21 CTCF HSF1 XRCC5 PIR46766 LINC02129
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02129 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02129 Gene

Genomic Locations for LINC02129 Gene
chr16:27,158,451-27,176,587
(GRCh38/hg38)
Size:
18,137 bases
Orientation:
Minus strand
chr16:27,169,775-27,187,908
(GRCh37/hg19)
Size:
18,134 bases
Orientation:
Minus strand

Genomic View for LINC02129 Gene

Genes around LINC02129 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02129 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02129 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LINC02129 Gene

Proteins for LINC02129 Gene

Post-translational modifications for LINC02129 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02129 Gene

Domains & Families for LINC02129 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02129 Gene

Function for LINC02129 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02129 Gene

Localization for LINC02129 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02129 Gene

Pathways & Interactions for LINC02129 Gene

PathCards logo

SuperPathways for LINC02129 Gene

No Data Available

Interacting Proteins for LINC02129 Gene

Gene Ontology (GO) - Biological Process for LINC02129 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02129 Gene

Drugs & Compounds for LINC02129 Gene

No Compound Related Data Available

Transcripts for LINC02129 Gene

mRNA/cDNA for LINC02129 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02129 Gene

No ASD Table

Relevant External Links for LINC02129 Gene

GeneLoc Exon Structure for
LINC02129
ECgene alternative splicing isoforms for
LINC02129

Expression for LINC02129 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02129 Gene

Orthologs for LINC02129 Gene

Evolution for LINC02129 Gene

ENSEMBL:
Gene Tree for LINC02129 (if available)
TreeFam:
Gene Tree for LINC02129 (if available)

No data available for Orthologs for LINC02129 Gene

Paralogs for LINC02129 Gene

No data available for Paralogs for LINC02129 Gene

Variants for LINC02129 Gene

Additional Variant Information for LINC02129 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02129

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02129 Gene

Disorders for LINC02129 Gene

No disorders were found for LINC02129 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02129 Gene

Publications for LINC02129 Gene

No publications were found for LINC02129 Gene.

No data available for External Links for LINC02129 Gene

Products for LINC02129 Gene

Sources for LINC02129 Gene

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