Aliases for LINC02123 Gene

Subcategory (RNA class) for LINC02123 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02123 Gene

  • Long Intergenic Non-Protein Coding RNA 2123 2 3 5
  • LINC02123 2 168
  • HSALNG0039952 167
  • NONHSAG039770 92

External Ids for LINC02123 Gene

Summaries for LINC02123 Gene

GeneCards Summary for LINC02123 Gene

LINC02123 (Long Intergenic Non-Protein Coding RNA 2123) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02123 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02123 Gene

Genomics for LINC02123 Gene

GeneHancer (GH) Regulatory Elements for LINC02123 Gene

Promoters and enhancers for LINC02123 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J007346 Enhancer 0.4 Ensembl 500.7 +0.6 570 2.6 NANOG POLR2A SMARCA4 LINC02123 ENSG00000249865 LINC02142 ENSG00000205976 ENSG00000251678
GH05J007362 Enhancer 0.4 Ensembl 0.4 -14.7 -14730 1.6 ETS1 POU5F1 NANOG ENSG00000249638 ADCY2 LOC105374645 LINC02123
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02123 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02123 Gene

Genomic Locations for LINC02123 Gene
chr5:7,346,986-7,348,671
(GRCh38/hg38)
Size:
1,686 bases
Orientation:
Minus strand
chr5:7,347,099-7,348,090
(GRCh37/hg19)
Size:
992 bases
Orientation:
Minus strand

Genomic View for LINC02123 Gene

Genes around LINC02123 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02123 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02123 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02123 Gene

Proteins for LINC02123 Gene

Post-translational modifications for LINC02123 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02123 Gene

Domains & Families for LINC02123 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02123 Gene

Function for LINC02123 Gene

Phenotypes From GWAS Catalog for LINC02123 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02123 Gene

Localization for LINC02123 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02123 Gene

Pathways & Interactions for LINC02123 Gene

PathCards logo

SuperPathways for LINC02123 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02123 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02123 Gene

Drugs & Compounds for LINC02123 Gene

No Compound Related Data Available

Transcripts for LINC02123 Gene

mRNA/cDNA for LINC02123 Gene

4 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
3 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02123 Gene

No ASD Table

Relevant External Links for LINC02123 Gene

GeneLoc Exon Structure for
LINC02123

Expression for LINC02123 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02123

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02123 Gene

Orthologs for LINC02123 Gene

Evolution for LINC02123 Gene

ENSEMBL:
Gene Tree for LINC02123 (if available)
TreeFam:
Gene Tree for LINC02123 (if available)

No data available for Orthologs for LINC02123 Gene

Paralogs for LINC02123 Gene

No data available for Paralogs for LINC02123 Gene

Variants for LINC02123 Gene

Additional dbSNP identifiers (rs#s) for LINC02123 Gene

Additional Variant Information for LINC02123 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02123

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02123 Gene

Disorders for LINC02123 Gene

Additional Disease Information for LINC02123

No disorders were found for LINC02123 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02123 Gene

Publications for LINC02123 Gene

No publications were found for LINC02123 Gene.

No data available for Mastermind for LINC02123 Gene

Products for LINC02123 Gene

Sources for LINC02123 Gene