Aliases for LINC02099 Gene

Subcategory (RNA class) for LINC02099 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02099 Gene

  • Long Intergenic Non-Protein Coding RNA 2099 2 3 5
  • LINC02099 2 168
  • HSALNG0064314 167
  • NONHSAG049885 92

External Ids for LINC02099 Gene

Summaries for LINC02099 Gene

GeneCards Summary for LINC02099 Gene

LINC02099 (Long Intergenic Non-Protein Coding RNA 2099) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC02099 include Breast Cancer.

Additional gene information for LINC02099 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02099 Gene

Genomics for LINC02099 Gene

GeneHancer (GH) Regulatory Elements for LINC02099 Gene

Promoters and enhancers for LINC02099 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02099 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02099 Gene

Genomic Locations for LINC02099 Gene
chr8:29,747,960-29,798,685
(GRCh38/hg38)
Size:
50,726 bases
Orientation:
Plus strand
chr8:29,605,825-29,656,008
(GRCh37/hg19)
Size:
50,184 bases
Orientation:
Plus strand

Genomic View for LINC02099 Gene

Genes around LINC02099 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02099 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02099 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02099 Gene

Proteins for LINC02099 Gene

Post-translational modifications for LINC02099 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02099 Gene

Domains & Families for LINC02099 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02099 Gene

Function for LINC02099 Gene

Phenotypes From GWAS Catalog for LINC02099 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02099 Gene

Localization for LINC02099 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02099 Gene

Pathways & Interactions for LINC02099 Gene

PathCards logo

SuperPathways for LINC02099 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02099 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02099 Gene

Drugs & Compounds for LINC02099 Gene

No Compound Related Data Available

Transcripts for LINC02099 Gene

mRNA/cDNA for LINC02099 Gene

13 RNACentral transcripts :
3 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
3 LncBook transcripts :
8 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02099 Gene

No ASD Table

Relevant External Links for LINC02099 Gene

GeneLoc Exon Structure for
LINC02099

Expression for LINC02099 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02099

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02099 Gene

Orthologs for LINC02099 Gene

Evolution for LINC02099 Gene

ENSEMBL:
Gene Tree for LINC02099 (if available)
TreeFam:
Gene Tree for LINC02099 (if available)

No data available for Orthologs for LINC02099 Gene

Paralogs for LINC02099 Gene

No data available for Paralogs for LINC02099 Gene

Variants for LINC02099 Gene

Additional dbSNP identifiers (rs#s) for LINC02099 Gene

Additional Variant Information for LINC02099 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02099

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02099 Gene

Disorders for LINC02099 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LINC02099 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
breast cancer
  • breast cancer, familial
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for LINC02099

genes like me logo Genes that share disorders with LINC02099: view

No data available for UniProtKB/Swiss-Prot and Genatlas for LINC02099 Gene

Publications for LINC02099 Gene

  1. Tissue-specific Co-expression of Long Non-coding and Coding RNAs Associated with Breast Cancer. (PMID: 27597120) Wu W … He C (Scientific reports 2016) 2 3 54
  2. Long noncoding RNA expression profile in fibroblast-like synoviocytes from patients with rheumatoid arthritis. (PMID: 27716329) Zhang Y … Li XJ (Arthritis research & therapy 2016) 2 3 54
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for LINC02099 Gene

Sources for LINC02099 Gene