Aliases for LINC02093 Gene

Subcategory (RNA class) for LINC02093 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for LINC02093 Gene

  • Long Intergenic Non-Protein Coding RNA 2093 2 3 5
  • LINC02093 2 5 165
  • NONHSAG020864.2 91

External Ids for LINC02093 Gene

Summaries for LINC02093 Gene

GeneCards Summary for LINC02093 Gene

LINC02093 (Long Intergenic Non-Protein Coding RNA 2093) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02093 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02093 Gene

Genomics for LINC02093 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02093 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J013306 Enhancer 0.8 ENCODE 600.7 +0.0 22 0.2 GATAD2A CTCF TEAD4 ZNF629 JUND PRDM1 REST GABPA CEBPA CEBPB LINC02093 lnc-ELAC2-7 ELAC2 HS3ST3A1
GH17J013307 Enhancer 0.7 Ensembl 600.7 +0.3 270 0.2 GATAD2A CTCF ZNF629 PRDM1 CBX3 ZNF639 ZNF444 YY1 ZNF217 ATF2 LINC02093 HS3ST3A1 lnc-ELAC2-7 ELAC2
GH17J013312 Enhancer 0.2 Ensembl 0.4 -6.2 -6230 0.4 HS3ST3A1 L13714-189 LINC02093 ELAC2
GH17J013283 Enhancer 0.2 Ensembl 0.4 +22.7 22670 1 LINC02093 lnc-ELAC2-7 ELAC2 HS3ST3A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02093 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02093 Gene

Genomic Locations for LINC02093 Gene
chr17:13,299,181-13,306,771
(GRCh38/hg38)
Size:
7,591 bases
Orientation:
Minus strand
chr17:13,202,501-13,210,077
(GRCh37/hg19)
Size:
7,577 bases
Orientation:
Minus strand

Genomic View for LINC02093 Gene

Genes around LINC02093 on UCSC Golden Path with GeneCards custom track
LINC02093 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02093 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02093 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02093 Gene

Proteins for LINC02093 Gene

Post-translational modifications for LINC02093 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02093 Gene

Domains & Families for LINC02093 Gene

Gene Families for LINC02093 Gene

genes like me logo Genes that share domains with LINC02093: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02093 Gene

Function for LINC02093 Gene

Phenotypes From GWAS Catalog for LINC02093 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02093 Gene

Localization for LINC02093 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02093 Gene

Pathways & Interactions for LINC02093 Gene

PathCards logo

SuperPathways for LINC02093 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02093 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02093 Gene

Drugs & Compounds for LINC02093 Gene

No Compound Related Data Available

Transcripts for LINC02093 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02093 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004AEBA7_9606 lncRNA 485 3

Ensembl: ENST00000440522 (view in UCSC) ,

LNCipedia: LINC02093:3,

NONCODE: NONHSAT145719.2,

URS0000BC446F_9606 lncRNA 488 2

HGNC: 52944,

RefSeq: NR_146885,

URS0000DB81B6_9606 lncRNA 599 1

Ensembl: ENST00000649037 (view in UCSC) ,

LINC02093 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02093 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02093 Gene

No ASD Table

Relevant External Links for LINC02093 Gene

GeneLoc Exon Structure for
LINC02093

Expression for LINC02093 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02093 Gene

Orthologs for LINC02093 Gene

Evolution for LINC02093 Gene

ENSEMBL:
Gene Tree for LINC02093 (if available)
TreeFam:
Gene Tree for LINC02093 (if available)

No data available for Orthologs for LINC02093 Gene

Paralogs for LINC02093 Gene

No data available for Paralogs for LINC02093 Gene

Variants for LINC02093 Gene

Additional dbSNP identifiers (rs#s) for LINC02093 Gene

Additional Variant Information for LINC02093 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02093

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02093 Gene

Disorders for LINC02093 Gene

Additional Disease Information for LINC02093

No disorders were found for LINC02093 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02093 Gene

Publications for LINC02093 Gene

No publications were found for LINC02093 Gene.

No data available for Mastermind for LINC02093 Gene

Products for LINC02093 Gene

Sources for LINC02093 Gene