Aliases for LINC02090 Gene

Data sources for LINC02090 Gene:

Subcategory (RNA class) for LINC02090 Gene


Aliases for LINC02090 Gene

External Ids for LINC02090 Gene

Previous GeneCards Identifiers for LINC02090 Gene

  • GC17P016983

Summaries for LINC02090 Gene

GeneCards Summary for LINC02090 Gene

LINC02090 (Long Intergenic Non-Protein Coding RNA 2090) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02090 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02090 Gene

Genomics for LINC02090 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02090 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J016986 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 250.7 +0.8 821 5.4 ZBTB10 SP1 BCL11A POLR2A CTCF ZIC2 SIN3A MAX TRIM22 IRF4 LINC02090 MPRIP FLCN PLD6 PIGL NT5M HSALNG0114905 TNFRSF13B HSALNG0114896
GH17J017139 Enhancer 1 Ensembl ENCODE dbSUPER 11.6 +152.7 152673 2.8 CTCF ZIC2 REST SMC3 RAD21 ZNF2 ZNF143 POLR2A ZBTB33 FOS HSALNG0114915 piR-47871 lnc-NT5M-2 piR-53960-001 PLD6 RNU6-767P MPRIP LINC02090 MPRIP-AS1 FLCN
GH17J016962 Enhancer 0.6 Ensembl dbSUPER 13.2 -21.8 -21827 0.2 HDGF ZNF217 AFF1 MLLT1 LINC02090 MPRIP TNFRSF13B lnc-TNFRSF13B-5 piR-54045-001 HSALNG0114900 HSALNG0114896 ENSG00000266302
GH17J016908 Enhancer 0.3 Ensembl ENCODE 12.4 -77.5 -77527 4.8 LINC02090 TBC1D27P KRT17P4 ADORA2B HSALNG0114901 lnc-TNFRSF13B-6 HSALNG0114900 HSALNG0114896 TNFRSF13B ENSG00000266302
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02090 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02090 Gene

Latest Assembly
1,850 bases
Plus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
1,848 bases
Plus strand

(GRCh37/hg19 by Ensembl)
1,849 bases
Plus strand

Genomic View for LINC02090 Gene

Genes around LINC02090 on UCSC Golden Path with GeneCards custom track
LINC02090 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02090 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02090 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02090 Gene

Proteins for LINC02090 Gene

Post-translational modifications for LINC02090 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02090 Gene

Domains & Families for LINC02090 Gene

Gene Families for LINC02090 Gene

genes like me logo Genes that share domains with LINC02090: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02090 Gene

Function for LINC02090 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02090 Gene

Localization for LINC02090 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02090 Gene

Pathways & Interactions for LINC02090 Gene

PathCards logo

SuperPathways for LINC02090 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02090 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02090 Gene

Drugs & Compounds for LINC02090 Gene

No Compound Related Data Available

Transcripts for LINC02090 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02090 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005E932A_9606 lncRNA 403 4

Ensembl: ENST00000419151 (view in UCSC) ,

LncBook: HSALNT0237945,

LNCipedia: LINC02090:3,


URS0000BC44AB_9606 lncRNA 399 1

RefSeq: NR_146886,

URS0001BE49F7_9606 lncRNA 400 1

LncBook: HSALNT0237945,

LINC02090 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02090 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02090 Gene

No ASD Table

Relevant External Links for LINC02090 Gene

GeneLoc Exon Structure for

Expression for LINC02090 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02090 Gene

Orthologs for LINC02090 Gene

Evolution for LINC02090 Gene

Gene Tree for LINC02090 (if available)
Gene Tree for LINC02090 (if available)

No data available for Orthologs for LINC02090 Gene

Paralogs for LINC02090 Gene

No data available for Paralogs for LINC02090 Gene

Variants for LINC02090 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02090 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02090 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02090 Gene

Disorders for LINC02090 Gene

Additional Disease Information for LINC02090

No disorders were found for LINC02090 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02090 Gene

Publications for LINC02090 Gene

  1. A molecular compendium of genes expressed in multiple myeloma. (PMID: 12200383) Claudio JO … Stewart AK (Blood 2002) 3

No data available for Mastermind for LINC02090 Gene

Products for LINC02090 Gene

Sources for LINC02090 Gene