Aliases for LINC02076 Gene

Subcategory (RNA class) for LINC02076 Gene

lncRNA

Quality Score for this RNA gene is

16

Aliases for LINC02076 Gene

  • Long Intergenic Non-Protein Coding RNA 2076 2 3 5
  • LINC02076 2 170
  • NONHSAG021056 94
  • HSALNG0115048 169

External Ids for LINC02076 Gene

Additional External Ids for LINC02076 Gene

Previous GeneCards Identifiers for LINC02076 Gene

  • GC17P018613
  • GC17P018634
  • GC17P018466
  • GC17P018491
  • GC17P018514
  • GC17P018538
  • GC17P018567
  • GC17P018595

Summaries for LINC02076 Gene

GeneCards Summary for LINC02076 Gene

LINC02076 (Long Intergenic Non-Protein Coding RNA 2076) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02076 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02076 Gene

Genomics for LINC02076 Gene

GeneHancer (GH) Regulatory Elements for LINC02076 Gene

Promoters and enhancers for LINC02076 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J018409 Promoter/Enhancer 1.9 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +0.6 642 4.8 ZNF785 ZNF701 ZNF280D SP7 NFRKB ZSCAN21 PRDM1 ZNF680 IKZF1 ZIC2 LINC02076 piR-60051-039 MAPK7 FOXO3B SMCR5 DRG2 SMCR8 ZNF286B SHMT1 NOS2P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02076 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02076 Gene

Genomic Locations for LINC02076 Gene
chr17:18,411,159-18,414,388
(GRCh38/hg38)
Size:
3,230 bases
Orientation:
Plus strand
chr17:18,314,473-18,317,694
(GRCh37/hg19)
Size:
3,222 bases
Orientation:
Plus strand

Genomic View for LINC02076 Gene

Genes around LINC02076 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02076 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02076 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02076 Gene

Proteins for LINC02076 Gene

Post-translational modifications for LINC02076 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02076 Gene

Domains & Families for LINC02076 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02076 Gene

Function for LINC02076 Gene

Phenotypes for LINC02076 Gene

GenomeRNAi human phenotypes for LINC02076:
genes like me logo Genes that share phenotypes with LINC02076: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LINC02076

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02076 Gene

Localization for LINC02076 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02076 Gene

Pathways & Interactions for LINC02076 Gene

PathCards logo

SuperPathways for LINC02076 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02076 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02076 Gene

Drugs & Compounds for LINC02076 Gene

No Compound Related Data Available

Transcripts for LINC02076 Gene

mRNA/cDNA for LINC02076 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(8) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(6) RNACentral transcripts :
(3) NONCODE transcripts :
(6) LNCipedia transcripts :
(2) LncBook transcripts :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LINC02076

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02076 Gene

No ASD Table

Relevant External Links for LINC02076 Gene

GeneLoc Exon Structure for
LINC02076
ECgene alternative splicing isoforms for
LINC02076

Expression for LINC02076 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02076 Gene

Orthologs for LINC02076 Gene

Evolution for LINC02076 Gene

ENSEMBL:
Gene Tree for LINC02076 (if available)
TreeFam:
Gene Tree for LINC02076 (if available)

No data available for Orthologs for LINC02076 Gene

Paralogs for LINC02076 Gene

No data available for Paralogs for LINC02076 Gene

Variants for LINC02076 Gene

Sequence variations from dbSNP and Humsavar for LINC02076 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000158214 -- 18,410,714(+) G/A upstream_transcript_variant
rs1000227093 -- 18,413,163(+) T/C intron_variant
rs1000489141 -- 18,410,439(+) A/G upstream_transcript_variant
rs1002226516 -- 18,409,916(+) T/C upstream_transcript_variant
rs1002664069 -- 18,410,101(+) C/T upstream_transcript_variant

Additional Variant Information for LINC02076 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02076

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02076 Gene

Disorders for LINC02076 Gene

Additional Disease Information for LINC02076

No disorders were found for LINC02076 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02076 Gene

Publications for LINC02076 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

Products for LINC02076 Gene

Sources for LINC02076 Gene