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Aliases for LINC02075 Gene

Subcategory (RNA class) for LINC02075 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02075 Gene

  • Long Intergenic Non-Protein Coding RNA 2075 2 3 5

External Ids for LINC02075 Gene

Summaries for LINC02075 Gene

GeneCards Summary for LINC02075 Gene

LINC02075 (Long Intergenic Non-Protein Coding RNA 2075) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02075 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02075 Gene

Genomics for LINC02075 Gene

GeneHancer (GH) Regulatory Elements for LINC02075 Gene

Promoters and enhancers for LINC02075 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I049494 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 0.3 -33.5 -33541 0.6 CTCF KLF1 ZBTB6 ZIC2 ZNF335 FOXM1 ZFHX2 CTBP1 GLIS2 ZBTB48 NGFR ENSG00000279036 LINC02075
GH17I049469 Enhancer 0.7 Ensembl ENCODE 0.4 -9.2 -9163 2.3 KLF1 NFIC ZFP36 RCOR1 ZIC2 CHD2 EZH2 NGFR PHB ENSG00000250186 RPL21P124 DLX3 ENSG00000248172 LINC02075 ENSG00000262039
GH17I049455 Enhancer 0.7 ENCODE 0.4 +5.5 5455 1.2 ZNF263 ZNF189 KLF17 ZNF398 NFXL1 ZKSCAN1 ZFHX2 ZNF341 ZFP36 PRDM10 ENSG00000207127 PHB NGFR ENSG00000250186 RPL21P124 LINC02075 EIF4EP2 ENSG00000262039
GH17I049453 Enhancer 0.7 ENCODE 0.4 +7.4 7395 1 DRAP1 ELF3 SOX13 SAP130 ZNF644 TEAD3 LCORL POLR2A ATF7 GATAD2A ENSG00000207127 PHB NGFR ENSG00000250186 RPL21P124 SPOP DLX3 ENSG00000248172 LINC02075 EIF4EP2
GH17I049438 Enhancer 0.7 Ensembl ENCODE 0.3 +22.3 22301 2.7 CTCF PKNOX1 ZFP36 ZNF398 FOS ZNF623 SPI1 ENSG00000207127 PHB NGFR RPL21P124 ENSG00000250186 NXPH3 LOC100288866 PHOSPHO1 DLX3 ENSG00000248172
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC02075 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02075 Gene

Genomic Locations for LINC02075 Gene
chr17:49,457,861-49,461,749
(GRCh38/hg38)
Size:
3,889 bases
Orientation:
Minus strand
chr17:47,535,223-47,539,111
(GRCh37/hg19)

Genomic View for LINC02075 Gene

Genes around LINC02075 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02075 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02075 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02075 Gene

Proteins for LINC02075 Gene

Post-translational modifications for LINC02075 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02075 Gene

Domains & Families for LINC02075 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02075 Gene

Function for LINC02075 Gene

Phenotypes From GWAS Catalog for LINC02075 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02075 Gene

Localization for LINC02075 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02075 Gene

Pathways & Interactions for LINC02075 Gene

SuperPathways for LINC02075 Gene

No Data Available

Interacting Proteins for LINC02075 Gene

Gene Ontology (GO) - Biological Process for LINC02075 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02075 Gene

Drugs & Compounds for LINC02075 Gene

No Compound Related Data Available

Transcripts for LINC02075 Gene

mRNA/cDNA for LINC02075 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02075 Gene

No ASD Table

Relevant External Links for LINC02075 Gene

GeneLoc Exon Structure for
LINC02075
ECgene alternative splicing isoforms for
LINC02075

Expression for LINC02075 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02075 Gene

Orthologs for LINC02075 Gene

Evolution for LINC02075 Gene

ENSEMBL:
Gene Tree for LINC02075 (if available)
TreeFam:
Gene Tree for LINC02075 (if available)

No data available for Orthologs for LINC02075 Gene

Paralogs for LINC02075 Gene

No data available for Paralogs for LINC02075 Gene

Variants for LINC02075 Gene

Sequence variations from dbSNP and Humsavar for LINC02075 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000021953 -- 49,458,136(-) C/T non_coding_transcript_variant
rs1000033396 -- 49,457,944(-) G/C non_coding_transcript_variant
rs1000076245 -- 49,459,272(-) T/C intron_variant
rs1000572620 -- 49,462,157(-) C/A upstream_transcript_variant
rs1000631099 -- 49,463,365(-) T/C upstream_transcript_variant

Additional Variant Information for LINC02075 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02075

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02075 Gene

Disorders for LINC02075 Gene

Additional Disease Information for LINC02075

No disorders were found for LINC02075 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02075 Gene

Publications for LINC02075 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LINC02075 Gene

Sources for LINC02075 Gene

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