Aliases for LINC02074 Gene

Subcategory (RNA class) for LINC02074 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for LINC02074 Gene

  • Long Intergenic Non-Protein Coding RNA 2074 2 3 5
  • LINC02074 2 170
  • NONHSAG022687 94
  • HSALNG0118624 169

External Ids for LINC02074 Gene

Summaries for LINC02074 Gene

GeneCards Summary for LINC02074 Gene

LINC02074 (Long Intergenic Non-Protein Coding RNA 2074) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02074 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02074 Gene

Genomics for LINC02074 Gene

GeneHancer (GH) Regulatory Elements for LINC02074 Gene

Promoters and enhancers for LINC02074 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J074152 Enhancer 0.8 Ensembl ENCODE 750.6 +1.2 1234 0.4 TCF7L2 NCOA3 MAFK MYC FOSL2 CREB1 CTBP1 NFE2L2 NFE2 PKNOX1 LINC02074 lnc-BTBD17-5
GH17J074155 Enhancer 0.2 Ensembl 750.6 +0.7 711 0.2 LINC02074 lnc-BTBD17-5
GH17J074117 Enhancer 1 Ensembl ENCODE CraniofacialAtlas 17.1 +36.6 36611 3.6 BCL6B SP7 PRDM1 ZIC2 ZNF629 ATF7 SP2 ZBTB20 ZBTB48 USF1 LINC02074 piR-53063-081 lnc-BTBD17-5
GH17J074108 Enhancer 0.6 FANTOM5 Ensembl 18.2 +45.3 45341 1.1 ZIC2 SCRT2 POLR2A LINC02074 KIF19 piR-50129-108 piR-57735
GH17J074123 Enhancer 0.4 Ensembl 12.1 +30.6 30611 0.8 NFE2 USF1 FOS USF2 LINC02074 piR-53063-081 lnc-BTBD17-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02074 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02074 Gene

Genomic Locations for LINC02074 Gene
chr17:74,041,884-74,154,212
(GRCh38/hg38)
Size:
112,329 bases
Orientation:
Minus strand

Genomic View for LINC02074 Gene

Genes around LINC02074 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02074 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02074 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02074 Gene

Proteins for LINC02074 Gene

Post-translational modifications for LINC02074 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02074 Gene

Domains & Families for LINC02074 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02074 Gene

Function for LINC02074 Gene

Phenotypes From GWAS Catalog for LINC02074 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02074 Gene

Localization for LINC02074 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02074 Gene

Pathways & Interactions for LINC02074 Gene

PathCards logo

SuperPathways for LINC02074 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02074 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02074 Gene

Drugs & Compounds for LINC02074 Gene

No Compound Related Data Available

Transcripts for LINC02074 Gene

mRNA/cDNA for LINC02074 Gene

(6) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(13) RNACentral transcripts :
(8) LncBook transcripts :
(10) NONCODE transcripts :
(8) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02074 Gene

No ASD Table

Relevant External Links for LINC02074 Gene

GeneLoc Exon Structure for
LINC02074
ECgene alternative splicing isoforms for
LINC02074

Expression for LINC02074 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02074 Gene

Orthologs for LINC02074 Gene

Evolution for LINC02074 Gene

ENSEMBL:
Gene Tree for LINC02074 (if available)
TreeFam:
Gene Tree for LINC02074 (if available)

No data available for Orthologs for LINC02074 Gene

Paralogs for LINC02074 Gene

No data available for Paralogs for LINC02074 Gene

Variants for LINC02074 Gene

Sequence variations from dbSNP and Humsavar for LINC02074 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000051689 -- 74,071,986(-) C/A/G intron_variant
rs1000078121 -- 74,090,706(-) G/A intron_variant
rs1000181789 -- 74,094,456(-) AGAGA/AGA intron_variant
rs1000189021 -- 74,062,160(-) G/A intron_variant, non_coding_transcript_variant
rs1000199258 -- 74,112,085(-) G/A intron_variant

Additional Variant Information for LINC02074 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02074

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02074 Gene

Disorders for LINC02074 Gene

No disorders were found for LINC02074 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02074 Gene

Publications for LINC02074 Gene

No publications were found for LINC02074 Gene.

No data available for External Links for LINC02074 Gene

Products for LINC02074 Gene

Sources for LINC02074 Gene