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Aliases for LINC02071 Gene

Subcategory (RNA class) for LINC02071 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02071 Gene

  • Long Intergenic Non-Protein Coding RNA 2071 2 3 5

External Ids for LINC02071 Gene

Summaries for LINC02071 Gene

GeneCards Summary for LINC02071 Gene

LINC02071 (Long Intergenic Non-Protein Coding RNA 2071) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02071 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02071 Gene

Genomics for LINC02071 Gene

GeneHancer (GH) Regulatory Elements for LINC02071 Gene

Promoters and enhancers for LINC02071 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I051335 Enhancer 0.6 dbSUPER 550.8 -1.7 -1702 3.6 KLF1 TEAD4 TAL1 KLF17 CBFA2T3 USF2 MNT TCF12 FOSL1 ID3 ENSG00000249658 LINC02071 LINC02072 UTP18 NME2 LINC02073
GH17I051322 Enhancer 0.7 ENCODE 0.4 +12.6 12639 0.1 DRAP1 MEIS2 CTCF PKNOX1 FOXA2 MAX RAD21 FOXK2 ARID2 ZNF143 LINC02071 ENSG00000249982 GC17M051260
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC02071 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02071 Gene

Genomic Locations for LINC02071 Gene
chr17:51,312,609-51,335,165
(GRCh38/hg38)
Size:
22,557 bases
Orientation:
Minus strand
chr17:49,389,970-49,412,526
(GRCh37/hg19)

Genomic View for LINC02071 Gene

Genes around LINC02071 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02071 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02071 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02071 Gene

Proteins for LINC02071 Gene

Post-translational modifications for LINC02071 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02071 Gene

Domains & Families for LINC02071 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02071 Gene

Function for LINC02071 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02071 Gene

Localization for LINC02071 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02071 Gene

Pathways & Interactions for LINC02071 Gene

SuperPathways for LINC02071 Gene

No Data Available

Interacting Proteins for LINC02071 Gene

Gene Ontology (GO) - Biological Process for LINC02071 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02071 Gene

Drugs & Compounds for LINC02071 Gene

No Compound Related Data Available

Transcripts for LINC02071 Gene

mRNA/cDNA for LINC02071 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02071 Gene

No ASD Table

Relevant External Links for LINC02071 Gene

GeneLoc Exon Structure for
LINC02071
ECgene alternative splicing isoforms for
LINC02071

Expression for LINC02071 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02071 Gene

Orthologs for LINC02071 Gene

Evolution for LINC02071 Gene

ENSEMBL:
Gene Tree for LINC02071 (if available)
TreeFam:
Gene Tree for LINC02071 (if available)

No data available for Orthologs for LINC02071 Gene

Paralogs for LINC02071 Gene

No data available for Paralogs for LINC02071 Gene

Variants for LINC02071 Gene

Sequence variations from dbSNP and Humsavar for LINC02071 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000130149 -- 51,314,023(-) G/A intron_variant
rs1000224775 -- 51,320,168(-) C/T intron_variant
rs1000282222 -- 51,334,492(-) G/A non_coding_transcript_variant
rs1000369224 -- 51,326,754(-) A/G intron_variant
rs1000473278 -- 51,332,765(-) C/T intron_variant

Additional Variant Information for LINC02071 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02071

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02071 Gene

Disorders for LINC02071 Gene

Additional Disease Information for LINC02071

No disorders were found for LINC02071 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02071 Gene

Publications for LINC02071 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LINC02071 Gene

Sources for LINC02071 Gene

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