Aliases for LINC02043 Gene

Subcategory (RNA class) for LINC02043 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02043 Gene

  • Long Intergenic Non-Protein Coding RNA 2043 2 3 5
  • LINC02043 2 168
  • HSALNG0031394 167
  • NONHSAG036926 92

External Ids for LINC02043 Gene

Summaries for LINC02043 Gene

GeneCards Summary for LINC02043 Gene

LINC02043 (Long Intergenic Non-Protein Coding RNA 2043) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02043 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02043 Gene

Genomics for LINC02043 Gene

GeneHancer (GH) Regulatory Elements for LINC02043 Gene

Promoters and enhancers for LINC02043 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02043 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02043 Gene

Genomic Locations for LINC02043 Gene
chr3:186,810,880-186,827,538
(GRCh38/hg38)
Size:
16,659 bases
Orientation:
Minus strand
chr3:186,528,669-186,543,310
(GRCh37/hg19)
Size:
14,642 bases
Orientation:
Minus strand

Genomic View for LINC02043 Gene

Genes around LINC02043 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02043 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02043 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02043 Gene

Proteins for LINC02043 Gene

Post-translational modifications for LINC02043 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02043 Gene

Domains & Families for LINC02043 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02043 Gene

Function for LINC02043 Gene

Phenotypes From GWAS Catalog for LINC02043 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02043 Gene

Localization for LINC02043 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02043 Gene

Pathways & Interactions for LINC02043 Gene

PathCards logo

SuperPathways for LINC02043 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02043 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02043 Gene

Drugs & Compounds for LINC02043 Gene

No Compound Related Data Available

Transcripts for LINC02043 Gene

mRNA/cDNA for LINC02043 Gene

7 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
1 LncBook transcripts :
6 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02043 Gene

No ASD Table

Relevant External Links for LINC02043 Gene

GeneLoc Exon Structure for
LINC02043

Expression for LINC02043 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02043

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02043 Gene

Orthologs for LINC02043 Gene

Evolution for LINC02043 Gene

ENSEMBL:
Gene Tree for LINC02043 (if available)
TreeFam:
Gene Tree for LINC02043 (if available)

No data available for Orthologs for LINC02043 Gene

Paralogs for LINC02043 Gene

No data available for Paralogs for LINC02043 Gene

Variants for LINC02043 Gene

Additional dbSNP identifiers (rs#s) for LINC02043 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC02043 Gene

Variant ID Type Subtype PubMed ID
dgv5005n100 CNV gain 25217958
esv2726341 CNV deletion 23290073
esv2759206 CNV loss 17122850
esv34136 CNV loss 18971310
esv3563035 CNV deletion 23714750
esv3893839 CNV gain 25118596
nsv1001111 CNV gain 25217958
nsv1012615 CNV gain 25217958

Additional Variant Information for LINC02043 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02043

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC02043 Gene

Disorders for LINC02043 Gene

Additional Disease Information for LINC02043

No disorders were found for LINC02043 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02043 Gene

Publications for LINC02043 Gene

  1. A genome-wide association study reveals variants in ARL15 that influence adiponectin levels. (PMID: 20011104) Richards JB … GIANT Consortium (PLoS genetics 2009) 3 54
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for LINC02043 Gene

Products for LINC02043 Gene

Sources for LINC02043 Gene