Aliases for LINC01994 Gene

Subcategory (RNA class) for LINC01994 Gene

lncRNA

Number of RNA Genes sources:

1 / 14

Aliases for LINC01994 Gene

  • Long Intergenic Non-Protein Coding RNA 1994 2 3 5
  • LINC01994 2 168

External Ids for LINC01994 Gene

Summaries for LINC01994 Gene

GeneCards Summary for LINC01994 Gene

LINC01994 (Long Intergenic Non-Protein Coding RNA 1994) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01994 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01994 Gene

Genomics for LINC01994 Gene

GeneHancer (GH) Regulatory Elements for LINC01994 Gene

Promoters and enhancers for LINC01994 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J182486 Enhancer 0.6 Ensembl 500.7 +0.3 263 1.8 RFX1 WT1 FOXA2 DPF2 SCRT1 PRDM6 ZNF18 GLIS1 ZNF398 GATA3 LINC01994 lnc-ATP11B-4
GH03J182487 Enhancer 0.6 Ensembl 500.7 -1.0 -1037 0.4 OSR2 WT1 POLR2A IKZF3 ZNF843 PRDM6 ZNF18 FEZF1 GLIS1 SMARCA4 LINC01994 lnc-ATP11B-4 LINC01995
GH03J182488 Enhancer 0.3 Ensembl 500.7 -1.5 -1537 0.2 ZNF10 OSR2 LINC01994 lnc-ATP11B-4 LINC01995
GH03J182484 Enhancer 0.3 Ensembl 500.7 +1.7 1663 0.2 ZNF366 USF1 LINC01994 lnc-ATP11B-4
GH03J182490 Enhancer 0.6 Ensembl 0.7 -4.9 -4937 1.8 CTCF ZSCAN5C REST SMC3 OSR2 GATA3 ZNF654 RAD21 PRDM4 MIXL1 LINC01994 LINC01995
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01994 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01994 Gene

Genomic Locations for LINC01994 Gene
chr3:182,446,970-182,486,364
(GRCh38/hg38)
Size:
39,395 bases
Orientation:
Minus strand
chr3:182,164,758-182,204,152
(GRCh37/hg19)
Size:
39,395 bases
Orientation:
Minus strand

Genomic View for LINC01994 Gene

Genes around LINC01994 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01994 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01994 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01994 Gene

Proteins for LINC01994 Gene

Post-translational modifications for LINC01994 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01994 Gene

Domains & Families for LINC01994 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01994 Gene

Function for LINC01994 Gene

Phenotypes From GWAS Catalog for LINC01994 Gene

Phenotypes for LINC01994 Gene

genes like me logo Genes that share phenotypes with LINC01994: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01994 Gene

Localization for LINC01994 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01994 Gene

Pathways & Interactions for LINC01994 Gene

PathCards logo

SuperPathways for LINC01994 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01994 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01994 Gene

Drugs & Compounds for LINC01994 Gene

No Compound Related Data Available

Transcripts for LINC01994 Gene

mRNA/cDNA for LINC01994 Gene

2 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01994 Gene

No ASD Table

Relevant External Links for LINC01994 Gene

GeneLoc Exon Structure for
LINC01994

Expression for LINC01994 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01994

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01994 Gene

Orthologs for LINC01994 Gene

Evolution for LINC01994 Gene

ENSEMBL:
Gene Tree for LINC01994 (if available)
TreeFam:
Gene Tree for LINC01994 (if available)

No data available for Orthologs for LINC01994 Gene

Paralogs for LINC01994 Gene

No data available for Paralogs for LINC01994 Gene

Variants for LINC01994 Gene

Additional dbSNP identifiers (rs#s) for LINC01994 Gene

Additional Variant Information for LINC01994 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01994

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01994 Gene

Disorders for LINC01994 Gene

Additional Disease Information for LINC01994

No disorders were found for LINC01994 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01994 Gene

Publications for LINC01994 Gene

No publications were found for LINC01994 Gene.

No data available for Mastermind for LINC01994 Gene

Products for LINC01994 Gene

Sources for LINC01994 Gene