Aliases for LINC01991 Gene

Subcategory (RNA class) for LINC01991 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01991 Gene

  • Long Intergenic Non-Protein Coding RNA 1991 2 3 5
  • LINC01991 2 168
  • NONHSAG036944 92
  • HSALNG0031448 167

External Ids for LINC01991 Gene

Summaries for LINC01991 Gene

GeneCards Summary for LINC01991 Gene

LINC01991 (Long Intergenic Non-Protein Coding RNA 1991) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01991 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01991 Gene

Genomics for LINC01991 Gene

GeneHancer (GH) Regulatory Elements for LINC01991 Gene

Promoters and enhancers for LINC01991 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J187985 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 500.7 +0.3 285 3 JUND FOS REST EP300 DEK CTCF ZNF316 GABPA FOSL2 CEBPB LINC01991 BCL6 LPP lnc-LPP-5
GH03J187983 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +3.7 3707 1 NCOR1 KDM6A SKI TEAD1 TBX3 ZKSCAN8 FOXA2 KMT2B KLF9 CEBPB LINC01991 lnc-LPP-5
GH03J187993 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.0 -14016 16.4 EP300 FOXK2 TCF12 POLR2G NCOR1 ZIC2 KDM6A TCF7 FOXA1 ZBTB25 BCL6 LPP ENSG00000225058 ENSG00000236412 LINC01991
GH03J187989 Enhancer 0.8 ENCODE dbSUPER 0.7 -2.8 -2843 1.6 TEAD4 POLR2A YY1 TCF12 SIN3A RAD21 TAF1 EP300 TBP SP1 LPP BCL6 LINC01991 ENSG00000236412
GH03J187967 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +18.5 18489 1.9 EP300 NCOR1 JUND FOS TCF7 CUX1 ZBTB25 SMARCC2 SKI TEAD1 BCL6 lnc-BCL6-7 LINC01991 ENSG00000236864
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01991 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01991 Gene

Genomic Locations for LINC01991 Gene
chr3:187,958,709-187,987,385
(GRCh38/hg38)
Size:
28,677 bases
Orientation:
Minus strand
chr3:187,676,563-187,694,195
(GRCh37/hg19)
Size:
17,633 bases
Orientation:
Minus strand

Genomic View for LINC01991 Gene

Genes around LINC01991 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01991 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01991 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01991 Gene

Proteins for LINC01991 Gene

Post-translational modifications for LINC01991 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01991 Gene

Domains & Families for LINC01991 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01991 Gene

Function for LINC01991 Gene

Phenotypes From GWAS Catalog for LINC01991 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01991 Gene

Localization for LINC01991 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01991 Gene

Pathways & Interactions for LINC01991 Gene

PathCards logo

SuperPathways for LINC01991 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01991 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01991 Gene

Drugs & Compounds for LINC01991 Gene

No Compound Related Data Available

Transcripts for LINC01991 Gene

mRNA/cDNA for LINC01991 Gene

7 RNACentral transcripts :
2 REFSEQ mRNAs :
3 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
5 LncBook transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01991 Gene

No ASD Table

Relevant External Links for LINC01991 Gene

GeneLoc Exon Structure for
LINC01991

Expression for LINC01991 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01991 Gene

Orthologs for LINC01991 Gene

Evolution for LINC01991 Gene

ENSEMBL:
Gene Tree for LINC01991 (if available)
TreeFam:
Gene Tree for LINC01991 (if available)

No data available for Orthologs for LINC01991 Gene

Paralogs for LINC01991 Gene

No data available for Paralogs for LINC01991 Gene

Variants for LINC01991 Gene

Additional dbSNP identifiers (rs#s) for LINC01991 Gene

Additional Variant Information for LINC01991 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01991

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01991 Gene

Disorders for LINC01991 Gene

Additional Disease Information for LINC01991

No disorders were found for LINC01991 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01991 Gene

Publications for LINC01991 Gene

No publications were found for LINC01991 Gene.

No data available for Mastermind for LINC01991 Gene

Products for LINC01991 Gene

Sources for LINC01991 Gene