Aliases for LINC01974 Gene

Data sources for LINC01974 Gene:

RNA type for LINC01974 Gene

lncRNA

Aliases for LINC01974 Gene

External Ids for LINC01974 Gene

Summaries for LINC01974 Gene

GeneCards Summary for LINC01974 Gene

LINC01974 (Long Intergenic Non-Protein Coding RNA 1974) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01974 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01974 Gene

Genomics for LINC01974 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01974 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J046912 Enhancer 0.2 FANTOM5 250.7 0.0 -36 0.2 HSALNG0116960 LOC112268191 LINC01974 WNT3 WNT9B GOSR2 LRRC37A2
GH17J046913 Enhancer 0.2 Ensembl 250.7 +0.7 714 0.2 HSALNG0116960 LOC112268191 LINC01974 WNT3 WNT9B HSALNG0116958 GOSR2 LRRC37A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01974 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01974 Gene

Latest Assembly
chr17:46,909,665-46,912,815
(GRCh38/hg38)
Size:
3,151 bases
Orientation:
Minus strand

Previous Assembly
chr17:44,987,108-44,988,878
(GRCh37/hg19 by Ensembl)
Size:
1,771 bases
Orientation:
Minus strand

Genomic View for LINC01974 Gene

Genes around LINC01974 on UCSC Golden Path with GeneCards custom track
LINC01974 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01974 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01974 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01974 Gene

Proteins for LINC01974 Gene

Post-translational modifications for LINC01974 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01974 Gene

Domains & Families for LINC01974 Gene

Gene Families for LINC01974 Gene

genes like me logo Genes that share domains with LINC01974: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01974 Gene

Function for LINC01974 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01974 Gene

Localization for LINC01974 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01974 Gene

Pathways & Interactions for LINC01974 Gene

PathCards logo

SuperPathways for LINC01974 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01974 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01974 Gene

Drugs & Compounds for LINC01974 Gene

No Compound Related Data Available

Transcripts for LINC01974 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01974 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000052B9A2_9606 lncRNA 494 2

Ensembl: ENST00000575126 (view in UCSC) ,

LNCipedia: LINC01974:5,

URS00008B3CCB_9606 lncRNA 767 3

LncBook: HSALNT0241626,

LNCipedia: LINC01974:4,

NONCODE: NONHSAT054218.2,

URS0001BD4BD3_9606 lncRNA 879 1

LncBook: HSALNT0241625,

URS0001BE8795_9606 lncRNA 767 1

LncBook: HSALNT0241626,

LINC01974 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01974 Gene

No ASD Table

Relevant External Links for LINC01974 Gene

GeneLoc Exon Structure for
LINC01974

No data available for mRNA/cDNA for LINC01974 Gene

Expression for LINC01974 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01974 Gene

Orthologs for LINC01974 Gene

Evolution for LINC01974 Gene

ENSEMBL:
Gene Tree for LINC01974 (if available)
TreeFam:
Gene Tree for LINC01974 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC01974

No data available for Orthologs for LINC01974 Gene

Paralogs for LINC01974 Gene

No data available for Paralogs for LINC01974 Gene

Variants for LINC01974 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01974 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01974 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01974
Leiden Open Variation Database (LOVD)
LINC01974

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01974 Gene

Disorders for LINC01974 Gene

No disorders were found for LINC01974 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01974 Gene

Publications for LINC01974 Gene

No publications were found for LINC01974 Gene.

No data available for Mastermind for LINC01974 Gene

Products for LINC01974 Gene

Sources for LINC01974 Gene