LINC01973 Gene (RNA Gene)

Long Intergenic Non-Protein Coding RNA 1973

GC17M077880
GIFtS:
11
See more...

Aliases for LINC01973 Gene

Data sources for LINC01973 Gene:

Subcategory (RNA class) for LINC01973 Gene

lncRNA

Aliases for LINC01973 Gene

External Ids for LINC01973 Gene

Summaries for LINC01973 Gene

GeneCards Summary for LINC01973 Gene

LINC01973 (Long Intergenic Non-Protein Coding RNA 1973) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01973 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01973 Gene

Genomics for LINC01973 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LINC01973 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01973 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01973 Gene

Latest Assembly
chr17:77,876,138-77,894,102
(GRCh38/hg38)
Size:
17,965 bases
Orientation:
Minus strand

Previous Assembly
chr17:75,875,083-75,880,169
(GRCh37/hg19 by Entrez Gene)
Size:
5,087 bases
Orientation:
Minus strand

chr17:75,875,109-75,878,659
(GRCh37/hg19 by Ensembl)
Size:
3,551 bases
Orientation:
Minus strand

Genomic View for LINC01973 Gene

Genes around LINC01973 on UCSC Golden Path with GeneCards custom track
LINC01973 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01973 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01973 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LINC01973 Gene

Proteins for LINC01973 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for LINC01973 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01973 Gene

Domains & Families for LINC01973 Gene

Gene Families for LINC01973 Gene

HGNC:
genes like me logo Genes that share domains with LINC01973: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01973 Gene

Function for LINC01973 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Phenotypes From GWAS Catalog for LINC01973 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01973 Gene

Localization for LINC01973 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01973 Gene

Pathways & Interactions for LINC01973 Gene

PathCards logo

SuperPathways for LINC01973 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01973 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01973 Gene

Drugs & Compounds for LINC01973 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for LINC01973 Gene

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  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01973 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075E1E4_9606 lncRNA 4706 3

RefSeq: NR_028337,

LNCipedia: LINC01973:4,

NONCODE: NONHSAT056173.2,

URS0000782BB9_9606 lncRNA 4680 2

Ensembl: ENST00000374983 (view in UCSC) ,

LNCipedia: LINC01973:5,

URS0000EEC8C7_9606 lncRNA 792 1

Ensembl: ENST00000664715 (view in UCSC) ,

URS00009C08DA_9606 lncRNA 525 2

LncBook: HSALNT0245726,

NONCODE: NONHSAT176612.1,

URS0000EA85DD_9606 lncRNA 2780 1

LncBook: HSALNT0245729,

LINC01973 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01973 Gene

1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :

CRISPR products for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LINC01973

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01973 Gene

No ASD Table

Relevant External Links for LINC01973 Gene

GeneLoc Exon Structure for
LINC01973

Expression for LINC01973 Gene

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  1. Primer products for research

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01973

No Expression Related Data Available

Primer products for research

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01973 Gene

Orthologs for LINC01973 Gene

Evolution for LINC01973 Gene

ENSEMBL:
Gene Tree for LINC01973 (if available)
TreeFam:
Gene Tree for LINC01973 (if available)

No data available for Orthologs for LINC01973 Gene

Paralogs for LINC01973 Gene

No data available for Paralogs for LINC01973 Gene

Variants for LINC01973 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01973 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01973 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01973

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01973 Gene

Disorders for LINC01973 Gene

Additional Disease Information for LINC01973

Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform
Open Targets Platform

No disorders were found for LINC01973 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01973 Gene

Publications for LINC01973 Gene

No publications were found for LINC01973 Gene.

No data available for Mastermind for LINC01973 Gene

Products for LINC01973 Gene

Sources for LINC01973 Gene