Aliases for LINC01969 Gene

Data sources for LINC01969 Gene:

RNA type for LINC01969 Gene

lncRNA

Aliases for LINC01969 Gene

External Ids for LINC01969 Gene

Summaries for LINC01969 Gene

GeneCards Summary for LINC01969 Gene

LINC01969 (Long Intergenic Non-Protein Coding RNA 1969) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC01969 include Lung Cancer Susceptibility 3.

Additional gene information for LINC01969 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01969 Gene

Genomics for LINC01969 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01969 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01969 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01969 Gene

Latest Assembly
chr17:50,208,955-50,216,756
(GRCh38/hg38)
Size:
7,802 bases
Orientation:
Plus strand

Previous Assembly
chr17:48,292,055-48,292,781
(GRCh37/hg19 by Entrez Gene)
Size:
727 bases
Orientation:
Plus strand

Genomic View for LINC01969 Gene

Genes around LINC01969 on UCSC Golden Path with GeneCards custom track
LINC01969 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01969 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01969 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01969 Gene

Proteins for LINC01969 Gene

Post-translational modifications for LINC01969 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01969 Gene

Domains & Families for LINC01969 Gene

Gene Families for LINC01969 Gene

genes like me logo Genes that share domains with LINC01969: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01969 Gene

Function for LINC01969 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01969 Gene

Localization for LINC01969 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01969 Gene

Pathways & Interactions for LINC01969 Gene

PathCards logo

SuperPathways for LINC01969 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01969 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01969 Gene

Drugs & Compounds for LINC01969 Gene

No Compound Related Data Available

Transcripts for LINC01969 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01969 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00004FE11E_9606 lncRNA 458 4

RefSeq: NR_110806,

LncBook: HSALNT0242329,

LNCipedia: LINC01969:17,

NONCODE: NONHSAT054622.2,

URS00008B69C1_9606 lncRNA 1292 3

LncBook: HSALNT0242328,

LNCipedia: LINC01969:16,

NONCODE: NONHSAT054621.2,

URS0000D5A55C_9606 lncRNA 855 2

LncBook: HSALNT0242324,

LNCipedia: LINC01969:10,

URS0000593FD4_9606 lncRNA 844 2

LNCipedia: LINC01969:15,

NONCODE: NONHSAT054619.2,

URS00009BD9E6_9606 lncRNA 455 2

LncBook: HSALNT0242330,

NONCODE: NONHSAT175351.1,

LINC01969 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01969 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01969 Gene

No ASD Table

Relevant External Links for LINC01969 Gene

GeneLoc Exon Structure for
LINC01969

Expression for LINC01969 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01969 Gene

Orthologs for LINC01969 Gene

No data available for Orthologs and Evolution for LINC01969 Gene

Paralogs for LINC01969 Gene

No data available for Paralogs for LINC01969 Gene

Variants for LINC01969 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01969 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LINC01969 Gene

Variant ID Type Subtype PubMed ID
nsv952339 CNV deletion 24416366

Additional Variant Information for LINC01969 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01969
Leiden Open Variation Database (LOVD)
LINC01969

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01969 Gene

Disorders for LINC01969 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LINC01969 Gene - From: LNC

Disorder Aliases PubMed IDs
lung cancer susceptibility 3
  • lncr3
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for LINC01969

genes like me logo Genes that share disorders with LINC01969: view

No data available for UniProtKB/Swiss-Prot and Genatlas for LINC01969 Gene

Publications for LINC01969 Gene

  1. Long noncoding RNA expression profiles of lung adenocarcinoma ascertained by microarray analysis. (PMID: 25089627) Xu G … Wang Y (PloS one 2014) 72

Products for LINC01969 Gene

Sources for LINC01969 Gene