Aliases for LINC01963 Gene

Data sources for LINC01963 Gene:

RNA type for LINC01963 Gene

lncRNA

Aliases for LINC01963 Gene

External Ids for LINC01963 Gene

Previous GeneCards Identifiers for LINC01963 Gene

  • GC02P216218

Summaries for LINC01963 Gene

GeneCards Summary for LINC01963 Gene

LINC01963 (Long Intergenic Non-Protein Coding RNA 1963) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01963 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01963 Gene

Genomics for LINC01963 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01963 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01963 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01963 Gene

Latest Assembly
chr2:216,209,816-216,220,192
(GRCh38/hg38)
Size:
10,377 bases
Orientation:
Plus strand

Previous Assembly
chr2:217,081,612-217,084,915
(GRCh37/hg19 by Entrez Gene)
Size:
3,304 bases
Orientation:
Plus strand

chr2:217,081,768-217,084,915
(GRCh37/hg19 by Ensembl)
Size:
3,148 bases
Orientation:
Plus strand

Genomic View for LINC01963 Gene

Genes around LINC01963 on UCSC Golden Path with GeneCards custom track
LINC01963 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01963 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01963 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01963 Gene

Proteins for LINC01963 Gene

Post-translational modifications for LINC01963 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01963 Gene

Domains & Families for LINC01963 Gene

Gene Families for LINC01963 Gene

genes like me logo Genes that share domains with LINC01963: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01963 Gene

Function for LINC01963 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01963 Gene

Localization for LINC01963 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01963 Gene

Pathways & Interactions for LINC01963 Gene

PathCards logo

SuperPathways for LINC01963 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01963 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01963 Gene

Drugs & Compounds for LINC01963 Gene

No Compound Related Data Available

Transcripts for LINC01963 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01963 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00003E9F1F_9606 lncRNA 3149 2

Ensembl: ENST00000562038 (view in UCSC) ,

LNCipedia: LINC01963:12,

URS000075B935_9606 lncRNA 3304 1

RefSeq: NR_037701,

URS00008BC6D1_9606 lncRNA 2032 3

LncBook: HSALNT0046946,

LNCipedia: LINC01963:8,

NONCODE: NONHSAT076791.2,

URS00008B8906_9606 lncRNA 1938 3

LncBook: HSALNT0046949,

LNCipedia: LINC01963:10,

NONCODE: NONHSAT076794.2,

URS00008BAEA7_9606 lncRNA 3304 2

LNCipedia: LINC01963:11,

NONCODE: NONHSAT076795.2,

LINC01963 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01963 Gene

1 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01963 Gene

No ASD Table

Relevant External Links for LINC01963 Gene

GeneLoc Exon Structure for
LINC01963

Expression for LINC01963 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01963

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01963 Gene

Orthologs for LINC01963 Gene

Evolution for LINC01963 Gene

ENSEMBL:
Gene Tree for LINC01963 (if available)
TreeFam:
Gene Tree for LINC01963 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC01963

No data available for Orthologs for LINC01963 Gene

Paralogs for LINC01963 Gene

No data available for Paralogs for LINC01963 Gene

Variants for LINC01963 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01963 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LINC01963 Gene

Variant ID Type Subtype PubMed ID
nsv1011506 CNV gain 25217958
nsv3159 CNV deletion 18451855

Additional Variant Information for LINC01963 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01963
Leiden Open Variation Database (LOVD)
LINC01963

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01963 Gene

Disorders for LINC01963 Gene

Additional Disease Information for LINC01963

No disorders were found for LINC01963 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01963 Gene

Publications for LINC01963 Gene

  1. Long non-coding RNA LINC01963 inhibits progression of pancreatic carcinoma by targeting miR-641/TMEFF2. (PMID: 32559621) Li K … Zheng P (Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 2020) 3
  2. Anti-inflammatory and analgesic effects displayed by peptides derived from PKI55 protein, an endogenous protein kinase C inhibitor. (PMID: 20644913) Selvatici R … Spisani S (Naunyn-Schmiedeberg's archives of pharmacology 2010) 3
  3. Structural characterization of promoter sequences of the gene coding human PKI55 protein, a protein kinase C inhibitor. (PMID: 19095038) Borgatti M … Selvatici R (Biochimie 2009) 3
  4. Study of synthetic peptides derived from the PKI55 protein, a protein kinase C modulator, in human neutrophils stimulated by the methyl ester derivative of the hydrophobic N-formyl tripeptide for-Met-Leu-Phe-OH. (PMID: 18167144) Selvatici R … Spisani S (The FEBS journal 2008) 3
  5. Effects of PKI55 protein, an endogenous protein kinase C modulator, on specific PKC isoforms activity and on human T cells proliferation. (PMID: 17467651) Selvatici R … Siniscalchi A (Archives of biochemistry and biophysics 2007) 3

Products for LINC01963 Gene

Sources for LINC01963 Gene