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Aliases for LINC01937 Gene

Subcategory (RNA class) for LINC01937 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01937 Gene

  • Long Intergenic Non-Protein Coding RNA 1937 2 3 5

External Ids for LINC01937 Gene

Summaries for LINC01937 Gene

GeneCards Summary for LINC01937 Gene

LINC01937 (Long Intergenic Non-Protein Coding RNA 1937) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01937 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01937 Gene

Genomics for LINC01937 Gene

GeneHancer (GH) Regulatory Elements for LINC01937 Gene

Promoters and enhancers for LINC01937 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J238719 Enhancer 0.8 Ensembl ENCODE 600.7 0.0 -33 1.8 CTCF RFX1 ZNF10 MIER3 RAD21 ZNF654 ZNF143 SMAD4 FOS XRCC5 LINC01937 ILKAP LOC105373963 ENSG00000286160 LINC01107
GH02J238726 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.4 8379 4.2 POLR2A JUND TWIST2 ENSG00000224252 LOC105373963 LINC01937
GH02J238683 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -35.1 -35127 3.3 NCOA3 FOSL2 CREB1 CEBPG POLR2A CEBPA REST CTBP1 SMARCC1 CEBPB LINC01937 LINC01107
GH02J238709 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -9.9 -9859 2.6 NR2F2 LINC01937 ENSG00000286160 LOC105373963 LINC01107
GH02J238694 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 -24.8 -24844 1.1 MAFK SP1 RXRA HNF4A LINC01937 LINC01107
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01937 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01937 Gene

Genomic Locations for LINC01937 Gene
chr2:238,720,324-238,744,084
(GRCh38/hg38)
Size:
23,761 bases
Orientation:
Plus strand
chr2:239,628,965-239,649,421
(GRCh37/hg19)
Size:
20,457 bases
Orientation:
Plus strand

Genomic View for LINC01937 Gene

Genes around LINC01937 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01937 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01937 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01937 Gene

Proteins for LINC01937 Gene

Post-translational modifications for LINC01937 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01937 Gene

Domains & Families for LINC01937 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01937 Gene

Function for LINC01937 Gene

Phenotypes From GWAS Catalog for LINC01937 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01937 Gene

Localization for LINC01937 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01937 Gene

Pathways & Interactions for LINC01937 Gene

PathCards logo

SuperPathways for LINC01937 Gene

No Data Available

Interacting Proteins for LINC01937 Gene

Gene Ontology (GO) - Biological Process for LINC01937 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01937 Gene

Drugs & Compounds for LINC01937 Gene

No Compound Related Data Available

Transcripts for LINC01937 Gene

mRNA/cDNA for LINC01937 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01937 Gene

No ASD Table

Relevant External Links for LINC01937 Gene

GeneLoc Exon Structure for
LINC01937
ECgene alternative splicing isoforms for
LINC01937

Expression for LINC01937 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01937 Gene

Orthologs for LINC01937 Gene

Evolution for LINC01937 Gene

ENSEMBL:
Gene Tree for LINC01937 (if available)
TreeFam:
Gene Tree for LINC01937 (if available)

No data available for Orthologs for LINC01937 Gene

Paralogs for LINC01937 Gene

No data available for Paralogs for LINC01937 Gene

Variants for LINC01937 Gene

Sequence variations from dbSNP and Humsavar for LINC01937 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000040427 -- 238,732,019(+) G/A intron_variant
rs1000052966 -- 238,726,613(+) A/G intron_variant
rs1000213211 -- 238,723,794(+) G/A intron_variant
rs1000275681 -- 238,743,391(+) C/T non_coding_transcript_variant
rs1000359682 -- 238,741,122(+) A/G non_coding_transcript_variant

Additional Variant Information for LINC01937 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01937

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01937 Gene

Disorders for LINC01937 Gene

No disorders were found for LINC01937 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01937 Gene

Publications for LINC01937 Gene

No publications were found for LINC01937 Gene.

No data available for External Links for LINC01937 Gene

Products for LINC01937 Gene

Sources for LINC01937 Gene

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