Aliases for LINC01926 Gene

Subcategory (RNA class) for LINC01926 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC01926 Gene

  • Long Intergenic Non-Protein Coding RNA 1926 2 3 5
  • LINC01926 2 170
  • HSALNG0121832 169
  • NONHSAG023972 94

External Ids for LINC01926 Gene

Summaries for LINC01926 Gene

GeneCards Summary for LINC01926 Gene

LINC01926 (Long Intergenic Non-Protein Coding RNA 1926) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01926 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01926 Gene

Genomics for LINC01926 Gene

GeneHancer (GH) Regulatory Elements for LINC01926 Gene

Promoters and enhancers for LINC01926 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J058807 Enhancer 0.4 Ensembl ENCODE 750.6 +0.1 67 1.3 NRF1 KR153194-084 LINC01926 ENSG00000199713
GH18J058818 Enhancer 0.4 Ensembl 0.4 +11.1 11132 0.8 PKNOX1 CBFB RUNX3 ENSG00000199713 piR-32214-314 LINC01926
GH18J058827 Enhancer 0.4 FANTOM5 0.4 +19.3 19261 0.3 NFYB ALPK2 piR-32214-314 HSALNG0121835 LINC01926
GH18J058828 Enhancer 0.4 Ensembl 0.3 +21.0 21033 2.2 NR2F2 ZFHX2 NFIA HSALNG0121835 piR-32214-314 LINC01926
GH18J058815 Enhancer 0.3 Ensembl 0.4 +7.6 7633 0.6 NRF1 ENSG00000199713 LINC01926
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01926 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01926 Gene

Genomic Locations for LINC01926 Gene
chr18:58,808,468-58,834,525
(GRCh38/hg38)
Size:
26,058 bases
Orientation:
Plus strand
chr18:56,481,112-56,501,596
(GRCh37/hg19)
Size:
20,485 bases
Orientation:
Plus strand

Genomic View for LINC01926 Gene

Genes around LINC01926 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01926 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01926 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01926 Gene

Proteins for LINC01926 Gene

Post-translational modifications for LINC01926 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01926 Gene

Domains & Families for LINC01926 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01926 Gene

Function for LINC01926 Gene

Phenotypes From GWAS Catalog for LINC01926 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01926 Gene

Localization for LINC01926 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01926 Gene

Pathways & Interactions for LINC01926 Gene

PathCards logo

SuperPathways for LINC01926 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01926 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01926 Gene

Drugs & Compounds for LINC01926 Gene

No Compound Related Data Available

Transcripts for LINC01926 Gene

mRNA/cDNA for LINC01926 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNACentral transcripts :
(2) NONCODE transcripts :
(2) LncBook transcripts :
(3) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01926 Gene

No ASD Table

Relevant External Links for LINC01926 Gene

GeneLoc Exon Structure for
LINC01926
ECgene alternative splicing isoforms for
LINC01926

Expression for LINC01926 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01926 Gene

Orthologs for LINC01926 Gene

Evolution for LINC01926 Gene

ENSEMBL:
Gene Tree for LINC01926 (if available)
TreeFam:
Gene Tree for LINC01926 (if available)

No data available for Orthologs for LINC01926 Gene

Paralogs for LINC01926 Gene

No data available for Paralogs for LINC01926 Gene

Variants for LINC01926 Gene

Sequence variations from dbSNP and Humsavar for LINC01926 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000135934 -- 58,825,075(+) C/T intron_variant
rs1000246896 -- 58,818,125(+) A/G intron_variant
rs1000377896 -- 58,833,280(+) C/T intron_variant
rs1000428592 -- 58,834,118(+) T/C intron_variant
rs1000733111 -- 58,823,031(+) G/A intron_variant

Additional Variant Information for LINC01926 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01926

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01926 Gene

Disorders for LINC01926 Gene

Additional Disease Information for LINC01926

No disorders were found for LINC01926 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01926 Gene

Publications for LINC01926 Gene

No publications were found for LINC01926 Gene.

No data available for External Links for LINC01926 Gene

Products for LINC01926 Gene

Sources for LINC01926 Gene