Aliases for LINC01922 Gene

Data sources for LINC01922 Gene:

Subcategory (RNA class) for LINC01922 Gene

lncRNA

Aliases for LINC01922 Gene

External Ids for LINC01922 Gene

Summaries for LINC01922 Gene

GeneCards Summary for LINC01922 Gene

LINC01922 (Long Intergenic Non-Protein Coding RNA 1922) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01922 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01922 Gene

Genomics for LINC01922 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01922 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J074407 Enhancer 0.4 Ensembl ENCODE 250.7 +1.8 1849 1.4 SCRT1 LINC01922 HSALNG0122437 HSALNG0122433 lnc-FAM69C-3 DIPK1C C18orf63
GH18J074417 Enhancer 0.5 Ensembl CraniofacialAtlas 0.4 +10.8 10831 1 HLF EGR2 HSALNG0122433 lnc-FAM69C-3 HSALNG0122437 LINC01922 DIPK1C C18orf63
GH18J074410 Enhancer 0.4 Ensembl CraniofacialAtlas 0.4 +5.8 5849 1.8 PKNOX1 HSALNG0122437 ZNF407-AS1 LINC01922 HSALNG0122433 lnc-FAM69C-3 DIPK1C C18orf63
GH18J074416 Enhancer 0.3 Ensembl CraniofacialAtlas 0.4 +9.6 9631 0.6 HSALNG0122433 LINC01922 lnc-FAM69C-3 HSALNG0122437 DIPK1C C18orf63
GH18J074403 Enhancer 0.2 Ensembl 0.7 -4.0 -3951 0.2 LINC01922 HSALNG0122435 HSALNG0122433 lnc-FAM69C-3 DIPK1C C18orf63
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01922 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01922 Gene

Latest Assembly
chr18:74,406,252-74,425,217
(GRCh38/hg38)
Size:
18,966 bases
Orientation:
Plus strand

Previous Assembly
chr18:72,076,683-72,080,444
(GRCh37/hg19 by Entrez Gene)
Size:
3,762 bases
Orientation:
Plus strand

chr18:72,076,650-72,080,444
(GRCh37/hg19 by Ensembl)
Size:
3,795 bases
Orientation:
Plus strand

Genomic View for LINC01922 Gene

Genes around LINC01922 on UCSC Golden Path with GeneCards custom track
LINC01922 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01922 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01922 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01922 Gene

Proteins for LINC01922 Gene

Post-translational modifications for LINC01922 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01922 Gene

Domains & Families for LINC01922 Gene

Gene Families for LINC01922 Gene

genes like me logo Genes that share domains with LINC01922: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01922 Gene

Function for LINC01922 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01922 Gene

Localization for LINC01922 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01922 Gene

Pathways & Interactions for LINC01922 Gene

PathCards logo

SuperPathways for LINC01922 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01922 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01922 Gene

Drugs & Compounds for LINC01922 Gene

No Compound Related Data Available

Transcripts for LINC01922 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01922 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000028E616_9606 lncRNA 1706 4

Ensembl: ENST00000567168 (view in UCSC) ,

LncBook: HSALNT0253094,

LNCipedia: LINC01922:7,

NONCODE: NONHSAT059871.2,

URS0000058AD8_9606 lncRNA 720 3

Ensembl: ENST00000562582 (view in UCSC) ,

LNCipedia: LINC01922:6,

NONCODE: NONHSAT059870.2,

URS00008E3A27_9606 lncRNA 1703 1

RefSeq: NR_131977,

URS00008B838B_9606 lncRNA 1409 3

LncBook: HSALNT0253091,

LNCipedia: LINC01922:5,

NONCODE: NONHSAT178005.1,

URS0001BF86FA_9606 lncRNA 1841 1

LncBook: HSALNT0253096,

LINC01922 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01922 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01922 Gene

No ASD Table

Relevant External Links for LINC01922 Gene

GeneLoc Exon Structure for
LINC01922

Expression for LINC01922 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01922

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01922 Gene

Orthologs for LINC01922 Gene

Evolution for LINC01922 Gene

ENSEMBL:
Gene Tree for LINC01922 (if available)
TreeFam:
Gene Tree for LINC01922 (if available)

No data available for Orthologs for LINC01922 Gene

Paralogs for LINC01922 Gene

No data available for Paralogs for LINC01922 Gene

Variants for LINC01922 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01922 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01922 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01922

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01922 Gene

Disorders for LINC01922 Gene

Additional Disease Information for LINC01922

No disorders were found for LINC01922 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01922 Gene

Publications for LINC01922 Gene

No publications were found for LINC01922 Gene.

No data available for Mastermind for LINC01922 Gene

Products for LINC01922 Gene

Sources for LINC01922 Gene