Aliases for LINC01918 Gene

Subcategory (RNA class) for LINC01918 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01918 Gene

  • Long Intergenic Non-Protein Coding RNA 1918 2 3 5
  • LINC01918 2 168
  • NONHSAG028814 92
  • HSALNG0017561 167

External Ids for LINC01918 Gene

Summaries for LINC01918 Gene

GeneCards Summary for LINC01918 Gene

LINC01918 (Long Intergenic Non-Protein Coding RNA 1918) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01918 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01918 Gene

Genomics for LINC01918 Gene

GeneHancer (GH) Regulatory Elements for LINC01918 Gene

Promoters and enhancers for LINC01918 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J105143 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 500.7 +1.2 1175 1.8 ZFX ZNF263 ZNF423 ZBTB26 HDAC2 POLR2A EZH2 KLF9 SP2 ZNF76 LINC01918 GPR45 LOC105373528
GH02J106027 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 5.4 +887.0 887035 4.2 EP300 ZNF217 TCF12 NCOR1 KDM6A TCF7 ZBTB25 ZBTB7A SMARCC2 SKI ECRG4 LINC01918 piR-42491-133
GH02J105179 Enhancer 0.9 Ensembl ENCODE 0.3 +37.8 37769 2.2 CTCF JUND REST MYC SMC3 ZNF316 NFIC FOS RAD21 FOSL2 GPR45 LOC105373528 LINC01918
GH02J105175 Enhancer 0.5 Ensembl 0.3 +33.0 32975 1.8 KLF4 ZNF341 GATA3 KLF9 KLF1 TARDBP FOXA1 GPR45 LOC105373528 LINC01918
GH02J105187 Enhancer 0.4 Ensembl 0.3 +44.5 44475 0.8 GATA3 FOXA1 DPF2 SMARCE1 FOS LOC105373528 LINC01918
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01918 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01918 Gene

Genomic Locations for LINC01918 Gene
chr2:105,142,926-105,148,962
(GRCh38/hg38)
Size:
6,037 bases
Orientation:
Plus strand
chr2:105,760,571-105,761,882
(GRCh37/hg19)
Size:
1,312 bases
Orientation:
Plus strand

Genomic View for LINC01918 Gene

Genes around LINC01918 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01918 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01918 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01918 Gene

Proteins for LINC01918 Gene

Post-translational modifications for LINC01918 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01918 Gene

Domains & Families for LINC01918 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01918 Gene

Function for LINC01918 Gene

Phenotypes From GWAS Catalog for LINC01918 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01918 Gene

Localization for LINC01918 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01918 Gene

Pathways & Interactions for LINC01918 Gene

PathCards logo

SuperPathways for LINC01918 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01918 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01918 Gene

Drugs & Compounds for LINC01918 Gene

No Compound Related Data Available

Transcripts for LINC01918 Gene

mRNA/cDNA for LINC01918 Gene

12 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
2 LncBook transcripts :
12 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01918 Gene

No ASD Table

Relevant External Links for LINC01918 Gene

GeneLoc Exon Structure for
LINC01918

Expression for LINC01918 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01918 Gene

Orthologs for LINC01918 Gene

Evolution for LINC01918 Gene

ENSEMBL:
Gene Tree for LINC01918 (if available)
TreeFam:
Gene Tree for LINC01918 (if available)

No data available for Orthologs for LINC01918 Gene

Paralogs for LINC01918 Gene

No data available for Paralogs for LINC01918 Gene

Variants for LINC01918 Gene

Additional dbSNP identifiers (rs#s) for LINC01918 Gene

Additional Variant Information for LINC01918 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01918

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01918 Gene

Disorders for LINC01918 Gene

Additional Disease Information for LINC01918

No disorders were found for LINC01918 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01918 Gene

Publications for LINC01918 Gene

No publications were found for LINC01918 Gene.

No data available for Mastermind for LINC01918 Gene

Products for LINC01918 Gene

Sources for LINC01918 Gene