Aliases for LINC01910 Gene

Subcategory (RNA class) for LINC01910 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for LINC01910 Gene

  • Long Intergenic Non-Protein Coding RNA 1910 2 3 5
  • LINC01910 2 5 165
  • NONHSAG024119.2 91

External Ids for LINC01910 Gene

Summaries for LINC01910 Gene

GeneCards Summary for LINC01910 Gene

LINC01910 (Long Intergenic Non-Protein Coding RNA 1910) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01910 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01910 Gene

Genomics for LINC01910 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01910 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J070375 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 600.1 +195.0 195048 11.3 GATAD2A REST TFE3 LEF1 IKZF1 RCOR2 ZNF7 JUND RBFOX2 PKNOX1 LINC01910 SOCS6 RTTN piR-50437-317 piR-57133-282
GH18J070620 Enhancer 0.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -46.2 -46220 5 FOXA1 FOXA2 POLR2A RTTN GTSCR1 LINC01910 SOCS6
GH18J070489 Promoter/Enhancer 1 Ensembl ENCODE 0.2 +86.1 86078 2 BRCA1 CTCF RAD21 SP1 TRIM22 PKNOX1 MNT CHD2 CEBPB ATF3 ENSG00000278971 lnc-SOCS6-9 RF00017-2702 RN7SL795P LOC105376872 lnc-SOCS6-8 LINC01910 SOCS6
GH18J070464 Promoter/Enhancer 1.1 ENCODE CraniofacialAtlas 0.1 +111.1 111141 1.2 ZNF221 CTCF PRDM10 ZNF174 ZNF300 ZIC2 ZNF776 PATZ1 SP1 ZNF501 LOC105376872 lnc-SOCS6-8 RTTN ENSG00000278971 LINC01910 SOCS6
GH18J070418 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.1 +153.9 153873 8.4 CREB1 GATAD2A PRDM10 REST JUND FOXA1 ZSCAN4 IRF2 SP1 HDAC1 SOCS6 RTTN LARP7P3 CD226 LOC112268215 lnc-SOCS6-7 LINC01910
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01910 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01910 Gene

Genomic Locations for LINC01910 Gene
chr18:70,380,140-70,576,081
(GRCh38/hg38)
Size:
195,942 bases
Orientation:
Minus strand
chr18:68,047,376-68,051,827
(GRCh37/hg19)
Size:
4,452 bases
Orientation:
Minus strand

Genomic View for LINC01910 Gene

Genes around LINC01910 on UCSC Golden Path with GeneCards custom track
LINC01910 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01910 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01910 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01910 Gene

Proteins for LINC01910 Gene

Post-translational modifications for LINC01910 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01910 Gene

Domains & Families for LINC01910 Gene

Gene Families for LINC01910 Gene

genes like me logo Genes that share domains with LINC01910: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01910 Gene

Function for LINC01910 Gene

Phenotypes From GWAS Catalog for LINC01910 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01910 Gene

Localization for LINC01910 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01910 Gene

Pathways & Interactions for LINC01910 Gene

PathCards logo

SuperPathways for LINC01910 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01910 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01910 Gene

Drugs & Compounds for LINC01910 Gene

No Compound Related Data Available

Transcripts for LINC01910 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01910 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000052741F_9606 lncRNA 2637 5

HGNC: 52729,

RefSeq: NR_110764,

Ensembl: ENST00000582251 (view in UCSC) ,

LNCipedia: LINC01910:5,

NONCODE: NONHSAT059776.2,

URS00008BCC59_9606 lncRNA 2545 2

LNCipedia: LINC01910:4,

NONCODE: NONHSAT059777.2,

LINC01910 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01910 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01910 Gene

No ASD Table

Relevant External Links for LINC01910 Gene

GeneLoc Exon Structure for
LINC01910

Expression for LINC01910 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01910 Gene

Orthologs for LINC01910 Gene

Evolution for LINC01910 Gene

ENSEMBL:
Gene Tree for LINC01910 (if available)
TreeFam:
Gene Tree for LINC01910 (if available)

No data available for Orthologs for LINC01910 Gene

Paralogs for LINC01910 Gene

No data available for Paralogs for LINC01910 Gene

Variants for LINC01910 Gene

Additional dbSNP identifiers (rs#s) for LINC01910 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01910 Gene

Variant ID Type Subtype PubMed ID
esv32736 CNV gain+loss 17666407
esv34014 CNV loss 18971310
esv3642985 CNV gain 21293372

Additional Variant Information for LINC01910 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01910

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01910 Gene

Disorders for LINC01910 Gene

No disorders were found for LINC01910 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01910 Gene

Publications for LINC01910 Gene

No publications were found for LINC01910 Gene.

Products for LINC01910 Gene

Sources for LINC01910 Gene