Aliases for LINC01895 Gene

Subcategory (RNA class) for LINC01895 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01895 Gene

  • Long Intergenic Non-Protein Coding RNA 1895 2 3 5
  • LINC01895 2 168
  • NONHSAG023227 92
  • HSALNG0119696 167

External Ids for LINC01895 Gene

Summaries for LINC01895 Gene

GeneCards Summary for LINC01895 Gene

LINC01895 (Long Intergenic Non-Protein Coding RNA 1895) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01895 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01895 Gene

Genomics for LINC01895 Gene

GeneHancer (GH) Regulatory Elements for LINC01895 Gene

Promoters and enhancers for LINC01895 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J003383 Enhancer 1.2 FANTOM5 Ensembl ENCODE 500.7 -0.9 -851 3 TCF12 KLF7 EP300 ZEB1 FOXA2 ZNF316 SRF FOSL2 ESR1 CEBPB LINC01895 lnc-TGIF1-5 TGIF1
GH18J003380 Enhancer 0.8 Ensembl ENCODE 0.7 +3.0 3005 1.5 EP300 CTCF FOS FOSL2 CEBPB SIN3A JUND NR2F1 GTF3C2 NR2F6 LINC01895 RPL31P59 lnc-DLGAP1-7
GH18J003340 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +43.0 42975 1.3 RBAK GTF2E2 ZBTB11 CTBP1 LEF1 CREB1 FOSL1 GABPA KLF13 SPI1 EMILIN2 TGIF1 HSALNG0119697 piR-39326 LINC01895
GH18J003367 Enhancer 0.8 Ensembl ENCODE 0.4 +15.3 15266 2.3 FOS ZBTB33 JUND RXRA HNF4A TCF7L2 ZNF366 RAD21 ZNF316 EGR1 METTL4 lnc-DLGAP1-7 RPL31P59 piR-39326 LINC01895
GH18J003332 Enhancer 1 FANTOM5 Ensembl ENCODE 0.2 +50.2 50197 1.5 MYC CREB3L1 ZNF592 POLR2H ZFHX2 MITF CHD7 L3MBTL2 EGR2 NR4A1 HSALNG0119695 RPL21P127 TGIF1 piR-50444-191 LINC01895
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01895 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01895 Gene

Genomic Locations for LINC01895 Gene
chr18:3,331,561-3,383,532
(GRCh38/hg38)
Size:
51,972 bases
Orientation:
Minus strand
chr18:3,347,774-3,350,557
(GRCh37/hg19)
Size:
2,784 bases
Orientation:
Minus strand

Genomic View for LINC01895 Gene

Genes around LINC01895 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01895 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01895 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01895 Gene

Proteins for LINC01895 Gene

Post-translational modifications for LINC01895 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01895 Gene

Domains & Families for LINC01895 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01895 Gene

Function for LINC01895 Gene

Phenotypes From GWAS Catalog for LINC01895 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01895 Gene

Localization for LINC01895 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01895 Gene

Pathways & Interactions for LINC01895 Gene

PathCards logo

SuperPathways for LINC01895 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01895 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01895 Gene

Drugs & Compounds for LINC01895 Gene

No Compound Related Data Available

Transcripts for LINC01895 Gene

mRNA/cDNA for LINC01895 Gene

25 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
15 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
5 LncBook transcripts :
7 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01895 Gene

No ASD Table

Relevant External Links for LINC01895 Gene

GeneLoc Exon Structure for
LINC01895

Expression for LINC01895 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01895 Gene

Orthologs for LINC01895 Gene

Evolution for LINC01895 Gene

ENSEMBL:
Gene Tree for LINC01895 (if available)
TreeFam:
Gene Tree for LINC01895 (if available)

No data available for Orthologs for LINC01895 Gene

Paralogs for LINC01895 Gene

No data available for Paralogs for LINC01895 Gene

Variants for LINC01895 Gene

Additional dbSNP identifiers (rs#s) for LINC01895 Gene

Additional Variant Information for LINC01895 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01895

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01895 Gene

Disorders for LINC01895 Gene

Additional Disease Information for LINC01895

No disorders were found for LINC01895 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01895 Gene

Publications for LINC01895 Gene

No publications were found for LINC01895 Gene.

No data available for Mastermind for LINC01895 Gene

Products for LINC01895 Gene

Sources for LINC01895 Gene