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Aliases for LINC01895 Gene
Subcategory (RNA class) for LINC01895 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LINC01895 Gene
External Ids for LINC01895 Gene
- HGNC: 52714
- Entrez Gene: 105371964
- Ensembl: ENSG00000259256
Summaries for LINC01895 Gene
GeneCards Summary for LINC01895 Gene
LINC01895 (Long Intergenic Non-Protein Coding RNA 1895) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC01895 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01895 Gene
Genomics for LINC01895 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC01895 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J003383 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE | 600.7 | -0.9 | -851 | 3 | PKNOX1 SP1 SOX6 MGA KLF7 ZXDB ESR1 EZH2 NFE2 FOXK2 | LINC01895 lnc-TGIF1-5 TGIF1 MYL12B | |
| GH18J003380 | Enhancer | 0.8 | Ensembl ENCODE | 0.7 | +3.0 | 3005 | 1.5 | IKZF1 CTCF CEBPB ARID3A SP1 EGR1 JUND EP300 FOSL2 SIN3A | LINC01895 RPL31P59 TGIF1 MYL12B | |
| GH18J003340 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE | 0.3 | +43.0 | 42975 | 1.3 | CREB1 PRDM10 ZNF629 LEF1 IKZF1 JUND PKNOX1 MTA1 HDAC1 SOX6 | EMILIN2 TGIF1 HSALNG0119697 piR-39326 LINC01895 MYL12B | |
| GH18J003367 | Enhancer | 0.7 | Ensembl ENCODE | 0.4 | +15.3 | 15266 | 2.3 | ZNF512 ZNF766 YY1 ZBTB33 JUND ZNF366 HNF4A RXRA ATF3 EGR1 | METTL4 piR-39326 lnc-DLGAP1-7 LINC01895 TGIF1 MYL12B | |
| GH18J003359 | Enhancer | 0.7 | Ensembl ENCODE | 0.4 | +23.2 | 23231 | 1.4 | SOX13 TFAP4 MBD1 ZBTB33 XRCC5 PPARG SP5 | piR-39326 RPL21P127 TGIF1 LINC01895 HSALNG0119697 MYL12B |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC01895 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC01895 Gene
Genomic Locations for LINC01895 Gene
- chr18:3,331,561-3,383,532
- (GRCh38/hg38)
- Size:
- 51,972 bases
- Orientation:
- Minus strand
- chr18:3,347,774-3,350,557
- (GRCh37/hg19)
- Size:
- 2,784 bases
- Orientation:
- Minus strand
Genomic View for LINC01895 Gene
Genes around LINC01895 on UCSC Golden Path with GeneCards custom track
LINC01895 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 18p11.31 by HGNC
- 18p11.31 by Entrez Gene
- 18p11.31 by Ensembl
LINC01895 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC01895 Gene
Proteins for LINC01895 Gene
Post-translational modifications for LINC01895 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01895
- Origene Custom Protein Services for LINC01895
No data available for DME Specific Peptides for LINC01895 Gene
Domains & Families for LINC01895 Gene
Gene Families for LINC01895 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01895 Gene
Function for LINC01895 Gene
Phenotypes From GWAS Catalog for LINC01895 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LINC01895
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01895 Gene
Localization for LINC01895 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01895 Gene
Transcripts for LINC01895 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01895 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS0000BC445E_9606 | lncRNA | 477 | 2 |
HGNC: 52714, RefSeq: NR_146506, |
| URS0000EEEA0C_9606 | lncRNA | 1043 | 1 |
Ensembl: ENST00000664193 (view in UCSC) , |
| URS0000EEF886_9606 | lncRNA | 955 | 1 |
Ensembl: ENST00000662880 (view in UCSC) , |
| URS0000EF1B2F_9606 | lncRNA | 892 | 1 |
Ensembl: ENST00000664706 (view in UCSC) , |
| URS0000EEBFB7_9606 | lncRNA | 850 | 1 |
Ensembl: ENST00000669368 (view in UCSC) , |
LINC01895 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LINC01895 Gene
- 1 NCBI additional mRNA sequence :
CRISPR Products
- Browse CRISPR knockouts for LINC01895
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LINC01895 Gene
- GeneLoc Exon Structure for
- LINC01895
Expression for LINC01895 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01895 Gene
Orthologs for LINC01895 Gene
No data available for Orthologs for LINC01895 Gene
Paralogs for LINC01895 Gene
No data available for Paralogs for LINC01895 Gene
Variants for LINC01895 Gene
Additional Variant Information for LINC01895 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC01895
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01895 Gene
Disorders for LINC01895 Gene
Additional Disease Information for LINC01895
No disorders were found for LINC01895 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01895 Gene
Publications for LINC01895 Gene
No publications were found for LINC01895 Gene.
No data available for Mastermind for LINC01895 Gene
Products for LINC01895 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01895
- Origene Custom Protein Services for LINC01895
- Browse OriGene Inhibitory RNA Products For LINC01895
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC01895
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC01895
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC01895
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC01895
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC01895
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC01895
Sources for LINC01895 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB