Aliases for LINC01893 Gene

Data sources for LINC01893 Gene:

Subcategory (RNA class) for LINC01893 Gene

lncRNA

Aliases for LINC01893 Gene

External Ids for LINC01893 Gene

Summaries for LINC01893 Gene

GeneCards Summary for LINC01893 Gene

LINC01893 (Long Intergenic Non-Protein Coding RNA 1893) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01893 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01893 Gene

Genomics for LINC01893 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01893 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J076208 Promoter 0.3 Ensembl 250.7 -0.4 -421 0.8 LINC01893 LOC105372206 ENSG00000263982 LOC105372204 ZNF516
GH18J076213 Enhancer 0.9 UCNEbase Ensembl ENCODE 0.7 +4.1 4135 1.5 BHLHE40 POLR2A PRDM1 ENSG00000263982 LINC01893 LOC105372208 LOC105372204 ZNF516
GH18J076219 Enhancer 0.3 UCNEbase 0.4 +10.1 10105 0.2 LOC105372208 piR-35907 LINC01893 LOC105372204 ZNF516
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01893 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01893 Gene

Latest Assembly
chr18:76,209,422-76,222,342
(GRCh38/hg38)
Size:
12,921 bases
Orientation:
Plus strand

Previous Assembly
chr18:73,921,465-73,927,779
(GRCh37/hg19 by Entrez Gene)
Size:
6,315 bases
Orientation:
Plus strand

chr18:73,921,465-73,927,657
(GRCh37/hg19 by Ensembl)
Size:
6,193 bases
Orientation:
Plus strand

Genomic View for LINC01893 Gene

Genes around LINC01893 on UCSC Golden Path with GeneCards custom track
LINC01893 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01893 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01893 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01893 Gene

Proteins for LINC01893 Gene

Post-translational modifications for LINC01893 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01893 Gene

Domains & Families for LINC01893 Gene

Gene Families for LINC01893 Gene

genes like me logo Genes that share domains with LINC01893: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01893 Gene

Function for LINC01893 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01893 Gene

Localization for LINC01893 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01893 Gene

Pathways & Interactions for LINC01893 Gene

PathCards logo

SuperPathways for LINC01893 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01893 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01893 Gene

Drugs & Compounds for LINC01893 Gene

No Compound Related Data Available

Transcripts for LINC01893 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01893 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EF6C62_9606 lncRNA 1071 1

Ensembl: ENST00000657495 (view in UCSC) ,

URS0000EF43B3_9606 lncRNA 689 1

Ensembl: ENST00000581750 (view in UCSC) ,

URS0000EEDC33_9606 lncRNA 672 1

Ensembl: ENST00000658613 (view in UCSC) ,

URS0000EF6BDE_9606 lncRNA 640 1

Ensembl: ENST00000661638 (view in UCSC) ,

URS0000BC4425_9606 lncRNA 601 1

RefSeq: NR_146507,

LINC01893 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01893 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01893 Gene

No ASD Table

Relevant External Links for LINC01893 Gene

GeneLoc Exon Structure for
LINC01893

Expression for LINC01893 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01893 Gene

Orthologs for LINC01893 Gene

Evolution for LINC01893 Gene

ENSEMBL:
Gene Tree for LINC01893 (if available)
TreeFam:
Gene Tree for LINC01893 (if available)

No data available for Orthologs for LINC01893 Gene

Paralogs for LINC01893 Gene

No data available for Paralogs for LINC01893 Gene

Variants for LINC01893 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01893 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01893 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01893

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01893 Gene

Disorders for LINC01893 Gene

Additional Disease Information for LINC01893

No disorders were found for LINC01893 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01893 Gene

Publications for LINC01893 Gene

No publications were found for LINC01893 Gene.

No data available for Mastermind for LINC01893 Gene

Products for LINC01893 Gene

Sources for LINC01893 Gene