Aliases for LINC01843 Gene

Subcategory (RNA class) for LINC01843 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01843 Gene

  • Long Intergenic Non-Protein Coding RNA 1843 2 3 5
  • LINC01843 2 168
  • NONHSAG041581 92
  • HSALNG0044969 167

External Ids for LINC01843 Gene

Summaries for LINC01843 Gene

GeneCards Summary for LINC01843 Gene

LINC01843 (Long Intergenic Non-Protein Coding RNA 1843) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01843 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01843 Gene

Genomics for LINC01843 Gene

GeneHancer (GH) Regulatory Elements for LINC01843 Gene

Promoters and enhancers for LINC01843 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01843 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01843 Gene

Genomic Locations for LINC01843 Gene
chr5:134,506,552-134,522,477
(GRCh38/hg38)
Size:
15,926 bases
Orientation:
Plus strand
chr5:133,842,243-133,844,920
(GRCh37/hg19)
Size:
2,678 bases
Orientation:
Plus strand

Genomic View for LINC01843 Gene

Genes around LINC01843 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01843 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01843 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01843 Gene

Proteins for LINC01843 Gene

Post-translational modifications for LINC01843 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01843 Gene

Domains & Families for LINC01843 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01843 Gene

Function for LINC01843 Gene

Phenotypes From GWAS Catalog for LINC01843 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01843 Gene

Localization for LINC01843 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01843 Gene

Pathways & Interactions for LINC01843 Gene

PathCards logo

SuperPathways for LINC01843 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01843 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01843 Gene

Drugs & Compounds for LINC01843 Gene

No Compound Related Data Available

Transcripts for LINC01843 Gene

mRNA/cDNA for LINC01843 Gene

9 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
3 LncBook transcripts :
8 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01843 Gene

No ASD Table

Relevant External Links for LINC01843 Gene

GeneLoc Exon Structure for
LINC01843

Expression for LINC01843 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01843

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01843 Gene

Orthologs for LINC01843 Gene

Evolution for LINC01843 Gene

ENSEMBL:
Gene Tree for LINC01843 (if available)
TreeFam:
Gene Tree for LINC01843 (if available)

No data available for Orthologs for LINC01843 Gene

Paralogs for LINC01843 Gene

No data available for Paralogs for LINC01843 Gene

Variants for LINC01843 Gene

Additional dbSNP identifiers (rs#s) for LINC01843 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01843 Gene

Variant ID Type Subtype PubMed ID
nsv509087 CNV insertion 20534489
nsv521720 CNV loss 19592680
nsv599733 CNV loss 21841781

Additional Variant Information for LINC01843 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01843

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01843 Gene

Disorders for LINC01843 Gene

Additional Disease Information for LINC01843

No disorders were found for LINC01843 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01843 Gene

Publications for LINC01843 Gene

No publications were found for LINC01843 Gene.

Products for LINC01843 Gene

Sources for LINC01843 Gene