Aliases for LINC01841 Gene

Subcategory (RNA class) for LINC01841 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01841 Gene

  • Long Intergenic Non-Protein Coding RNA 1841 2 3 5
  • LINC01841 2 5 165
  • NONHSAG024952.2 91
  • HSALNG0124293 164
  • CTC-548K16.2 3

External Ids for LINC01841 Gene

Summaries for LINC01841 Gene

GeneCards Summary for LINC01841 Gene

LINC01841 (Long Intergenic Non-Protein Coding RNA 1841) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01841 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01841 Gene

Genomics for LINC01841 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01841 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01841 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01841 Gene

Genomic Locations for LINC01841 Gene
chr19:14,305,458-14,370,196
(GRCh38/hg38)
Size:
64,739 bases
Orientation:
Minus strand
chr19:14,416,270-14,481,008
(GRCh37/hg19)
Size:
64,739 bases
Orientation:
Minus strand

Genomic View for LINC01841 Gene

Genes around LINC01841 on UCSC Golden Path with GeneCards custom track
LINC01841 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01841 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01841 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01841 Gene

Proteins for LINC01841 Gene

Post-translational modifications for LINC01841 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01841 Gene

Domains & Families for LINC01841 Gene

Gene Families for LINC01841 Gene

genes like me logo Genes that share domains with LINC01841: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01841 Gene

Function for LINC01841 Gene

Phenotypes From GWAS Catalog for LINC01841 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01841 Gene

Localization for LINC01841 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01841 Gene

Pathways & Interactions for LINC01841 Gene

PathCards logo

SuperPathways for LINC01841 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01841 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01841 Gene

Drugs & Compounds for LINC01841 Gene

No Compound Related Data Available

Transcripts for LINC01841 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01841 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000392978_9606 lncRNA 573 5

HGNC: 52655,

RefSeq: NR_134908,

Ensembl: ENST00000586698 (view in UCSC) ,

LNCipedia: LINC01841:6,

NONCODE: NONHSAT061403.2,

URS000017BF34_9606 lncRNA 523 3

Ensembl: ENST00000588438 (view in UCSC) ,

LNCipedia: LINC01841:5,

NONCODE: NONHSAT061405.2,

URS00008B6EAD_9606 lncRNA 285 3

LncBook: HSALNT0256208,

LNCipedia: LINC01841:7,

NONCODE: NONHSAT061404.2,

URS00009C479D_9606 lncRNA 285 2

LncBook: HSALNT0256209,

NONCODE: NONHSAT180186.1,

LINC01841 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01841 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01841 Gene

No ASD Table

Relevant External Links for LINC01841 Gene

GeneLoc Exon Structure for
LINC01841

Expression for LINC01841 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01841 Gene

Orthologs for LINC01841 Gene

Evolution for LINC01841 Gene

ENSEMBL:
Gene Tree for LINC01841 (if available)
TreeFam:
Gene Tree for LINC01841 (if available)

No data available for Orthologs for LINC01841 Gene

Paralogs for LINC01841 Gene

No data available for Paralogs for LINC01841 Gene

Variants for LINC01841 Gene

Additional dbSNP identifiers (rs#s) for LINC01841 Gene

Additional Variant Information for LINC01841 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01841

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01841 Gene

Disorders for LINC01841 Gene

Additional Disease Information for LINC01841

No disorders were found for LINC01841 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01841 Gene

Publications for LINC01841 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

Products for LINC01841 Gene

Sources for LINC01841 Gene