Aliases for LINC01837 Gene

Subcategory (RNA class) for LINC01837 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01837 Gene

  • Long Intergenic Non-Protein Coding RNA 1837 2 3 5
  • LINC01837 2 5 165
  • NONHSAG025447.2 91
  • NONHSAG025446.2 91
  • NONHSAG025449.2 91
  • HSALNG0125343 164

External Ids for LINC01837 Gene

Previous GeneCards Identifiers for LINC01837 Gene

  • GC19M031860
  • GC19M032072

Summaries for LINC01837 Gene

GeneCards Summary for LINC01837 Gene

LINC01837 (Long Intergenic Non-Protein Coding RNA 1837) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01837 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01837 Gene

Genomics for LINC01837 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01837 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J032072 Promoter 0.3 EPDnew 600.7 +0.0 13 0.1 LINC01837 LOC105376899 LINC01533 ZNF507 THEG5
GH19J031945 Promoter 0.3 EPDnew 600.1 +126.7 126663 0.1 LINC01837 RF00998-065 LOC105372364 THEG5 ZNF507
GH19J032068 Enhancer 0.4 FANTOM5 0.7 +3.3 3299 0.1 POLR2A CUX1 LINC01837 LINC01533 ZNF507 THEG5
GH19J032035 Enhancer 0.7 UCNEbase Ensembl 0.3 +36.0 36012 0.6 ZNF316 MAFF MAFK LINC01533 LINC01837 ZNF507 THEG5
GH19J031961 Enhancer 1.4 VISTA UCNEbase Ensembl ENCODE 0.1 +109.8 109813 2.2 GATAD2A SOX13 TCF7 CREM SMAD4 HNF4A NFIL3 NFIA ETV4 KDM1A LOC105372364 RF00998-065 LINC01837 THEG5 ZNF507
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01837 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01837 Gene

Genomic Locations for LINC01837 Gene
chr19:31,797,666-32,072,113
(GRCh38/hg38)
Size:
274,448 bases
Orientation:
Minus strand
chr19:32,458,005-32,516,697
(GRCh37/hg19)
Size:
58,693 bases
Orientation:
Minus strand

Genomic View for LINC01837 Gene

Genes around LINC01837 on UCSC Golden Path with GeneCards custom track
LINC01837 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01837 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01837 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01837 Gene

Proteins for LINC01837 Gene

Post-translational modifications for LINC01837 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01837 Gene

Domains & Families for LINC01837 Gene

Gene Families for LINC01837 Gene

genes like me logo Genes that share domains with LINC01837: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01837 Gene

Function for LINC01837 Gene

Phenotypes From GWAS Catalog for LINC01837 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01837 Gene

Localization for LINC01837 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01837 Gene

Pathways & Interactions for LINC01837 Gene

PathCards logo

SuperPathways for LINC01837 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01837 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01837 Gene

Drugs & Compounds for LINC01837 Gene

No Compound Related Data Available

Transcripts for LINC01837 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01837 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000026E3CA_9606 lncRNA 570 4

Ensembl: ENST00000593211 (view in UCSC) ,

LncBook: HSALNT0258389,

LNCipedia: LINC01837:35,

NONCODE: NONHSAT064155.2,

URS0000A99200_9606 lncRNA 1056 3

Ensembl: ENST00000636649 (view in UCSC) ,

LncBook: HSALNT0258390,

LNCipedia: LINC01837:22,

URS00002F44A6_9606 lncRNA 647 3

Ensembl: ENST00000590053 (view in UCSC) ,

LNCipedia: LINC01837:24,

NONCODE: NONHSAT064163.2,

URS0000E6540B_9606 lncRNA 3030 2

HGNC: 52653,

Ensembl: ENST00000651930 (view in UCSC) ,

URS0000A8DCB4_9606 lncRNA 1557 2

Ensembl: ENST00000635947 (view in UCSC) ,

LNCipedia: LINC01837:31,

LINC01837 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01837 Gene

No ASD Table

Relevant External Links for LINC01837 Gene

GeneLoc Exon Structure for
LINC01837

No data available for mRNA/cDNA for LINC01837 Gene

Expression for LINC01837 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01837 Gene

Orthologs for LINC01837 Gene

Evolution for LINC01837 Gene

ENSEMBL:
Gene Tree for LINC01837 (if available)
TreeFam:
Gene Tree for LINC01837 (if available)

No data available for Orthologs for LINC01837 Gene

Paralogs for LINC01837 Gene

No data available for Paralogs for LINC01837 Gene

Variants for LINC01837 Gene

Additional dbSNP identifiers (rs#s) for LINC01837 Gene

Additional Variant Information for LINC01837 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01837

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01837 Gene

Disorders for LINC01837 Gene

No disorders were found for LINC01837 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01837 Gene

Publications for LINC01837 Gene

No publications were found for LINC01837 Gene.

No data available for Mastermind for LINC01837 Gene

Products for LINC01837 Gene

Sources for LINC01837 Gene