Aliases for LINC01832 Gene

Subcategory (RNA class) for LINC01832 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01832 Gene

  • Long Intergenic Non-Protein Coding RNA 1832 2 3 5
  • LINC01832 2 168
  • HSALNG0019156 167
  • NONHSAG029393 92

External Ids for LINC01832 Gene

Summaries for LINC01832 Gene

GeneCards Summary for LINC01832 Gene

LINC01832 (Long Intergenic Non-Protein Coding RNA 1832) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01832 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01832 Gene

Genomics for LINC01832 Gene

GeneHancer (GH) Regulatory Elements for LINC01832 Gene

Promoters and enhancers for LINC01832 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J138121 Enhancer 0.9 Ensembl ENCODE 0.4 +22.0 22033 4.6 ZNF217 RBAK ZNF639 ZNF10 KLF4 RFX1 CUX1 ATF2 GATAD2B CTBP1 HNMT LINC01832 lnc-NXPH2-4
GH02J138107 Enhancer 0.6 Ensembl 0.4 +5.6 5623 1 FOXA2 FOS FOSL2 PBX2 SMAD4 JUND BCL6 HOMEZ EHMT2 RARA LINC01832 lnc-NXPH2-4
GH02J138105 Enhancer 0.4 Ensembl 0.7 +3.4 3423 0.2 ZNF217 MBD2 DPF2 FOSL2 LINC01832 lnc-NXPH2-4
GH02J138106 Enhancer 0.3 Ensembl 0.7 +4.7 4723 0.4 CEBPG PRDM4 LINC01832 lnc-NXPH2-4
GH02J138112 Enhancer 0.4 Ensembl 0.4 +10.9 10923 0.8 MAFF FOS FOSL2 MAFK NFE2 LINC01832 lnc-NXPH2-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01832 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01832 Gene

Genomic Locations for LINC01832 Gene
chr2:138,101,878-138,107,178
(GRCh38/hg38)
Size:
5,301 bases
Orientation:
Plus strand
chr2:138,859,454-138,863,475
(GRCh37/hg19)
Size:
4,022 bases
Orientation:
Plus strand

Genomic View for LINC01832 Gene

Genes around LINC01832 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01832 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01832 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01832 Gene

Proteins for LINC01832 Gene

Post-translational modifications for LINC01832 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01832 Gene

Domains & Families for LINC01832 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01832 Gene

Function for LINC01832 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01832 Gene

Localization for LINC01832 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01832 Gene

Pathways & Interactions for LINC01832 Gene

PathCards logo

SuperPathways for LINC01832 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01832 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01832 Gene

Drugs & Compounds for LINC01832 Gene

No Compound Related Data Available

Transcripts for LINC01832 Gene

mRNA/cDNA for LINC01832 Gene

3 RNACentral transcripts :
1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01832 Gene

No ASD Table

Relevant External Links for LINC01832 Gene

GeneLoc Exon Structure for
LINC01832

Expression for LINC01832 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01832 Gene

Orthologs for LINC01832 Gene

Evolution for LINC01832 Gene

ENSEMBL:
Gene Tree for LINC01832 (if available)
TreeFam:
Gene Tree for LINC01832 (if available)

No data available for Orthologs for LINC01832 Gene

Paralogs for LINC01832 Gene

No data available for Paralogs for LINC01832 Gene

Variants for LINC01832 Gene

Additional dbSNP identifiers (rs#s) for LINC01832 Gene

Additional Variant Information for LINC01832 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01832

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01832 Gene

Disorders for LINC01832 Gene

Additional Disease Information for LINC01832

No disorders were found for LINC01832 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01832 Gene

Publications for LINC01832 Gene

No publications were found for LINC01832 Gene.

No data available for Mastermind for LINC01832 Gene

Products for LINC01832 Gene

Sources for LINC01832 Gene