Aliases for LINC01832 Gene

Data sources for LINC01832 Gene:

RNA type for LINC01832 Gene

lncRNA

Aliases for LINC01832 Gene

External Ids for LINC01832 Gene

Previous GeneCards Identifiers for LINC01832 Gene

  • GC02P138103

Summaries for LINC01832 Gene

GeneCards Summary for LINC01832 Gene

LINC01832 (Long Intergenic Non-Protein Coding RNA 1832) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01832 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01832 Gene

Genomics for LINC01832 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01832 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J138080 Enhancer 0.2 Ensembl 250.7 -1.6 -1574 0.6 HSALNG0019156 LINC01832 HSALNG0019155 lnc-NXPH2-4 HNMT ENSG00000228043 SPOPL
GH02J138085 Enhancer 0.7 Ensembl 0.7 +4.9 4926 3.6 ZNF600 ATF2 NFIC CEBPB FEZF1 ZNF341 ZNF316 ZNF843 JUND ZNF146 piR-38051-163 LINC01832 HSALNG0019156 piR-38351-271 lnc-NXPH2-4 HNMT ENSG00000228043 SPOPL
GH02J138107 Enhancer 0.6 Ensembl 0.3 +25.6 25626 0.6 HOMEZ FOXA2 SMAD4 RARA FOSL2 JUND BCL6 HMG20A ZNF652 MEIS2 piR-38351-271 HSALNG0019156 LINC01832 lnc-NXPH2-4 HNMT ENSG00000228043 SPOPL
GH02J138093 Enhancer 0.5 Ensembl 0.4 +12.6 12626 1.8 MAFF ZNF316 MAFK MAFG EMSY piR-38051-163 piR-38351-271 HSALNG0019156 LINC01832 lnc-NXPH2-4 HNMT ENSG00000228043 SPOPL
GH02J138106 Enhancer 0.3 Ensembl 0.4 +24.7 24726 0.4 PRDM4 CEBPG piR-38351-271 HSALNG0019156 LINC01832 lnc-NXPH2-4 HNMT ENSG00000228043 SPOPL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01832 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01832 Gene

Latest Assembly
chr2:138,081,875-138,121,390
(GRCh38/hg38)
Size:
39,516 bases
Orientation:
Plus strand

Previous Assembly
chr2:138,859,454-138,863,475
(GRCh37/hg19 by Entrez Gene)
Size:
4,022 bases
Orientation:
Plus strand

chr2:138,859,454-138,863,475
(GRCh37/hg19 by Ensembl)
Size:
4,022 bases
Orientation:
Plus strand

Genomic View for LINC01832 Gene

Genes around LINC01832 on UCSC Golden Path with GeneCards custom track
LINC01832 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01832 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01832 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01832 Gene

Proteins for LINC01832 Gene

Post-translational modifications for LINC01832 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01832 Gene

Domains & Families for LINC01832 Gene

Gene Families for LINC01832 Gene

genes like me logo Genes that share domains with LINC01832: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01832 Gene

Function for LINC01832 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01832 Gene

Localization for LINC01832 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01832 Gene

Pathways & Interactions for LINC01832 Gene

PathCards logo

SuperPathways for LINC01832 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01832 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01832 Gene

Drugs & Compounds for LINC01832 Gene

No Compound Related Data Available

Transcripts for LINC01832 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01832 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000045F25B_9606 lncRNA 553 4

RefSeq: NR_135526,

LncBook: HSALNT0040432,

LNCipedia: LINC01832:3,

NONCODE: NONHSAT074656.2,

URS0000EF483E_9606 lncRNA 1832 1

Ensembl: ENST00000446520 (view in UCSC) ,

URS00009BD26E_9606 lncRNA 553 2

LncBook: HSALNT0040433,

NONCODE: NONHSAT182745.1,

URS0001BEBC1B_9606 lncRNA 2189 1

LncBook: HSALNT0040429,

URS0001BD16A0_9606 lncRNA 1676 1

LncBook: HSALNT0040434,

LINC01832 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01832 Gene

No ASD Table

Relevant External Links for LINC01832 Gene

GeneLoc Exon Structure for
LINC01832

No data available for mRNA/cDNA for LINC01832 Gene

Expression for LINC01832 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01832 Gene

Orthologs for LINC01832 Gene

Evolution for LINC01832 Gene

ENSEMBL:
Gene Tree for LINC01832 (if available)
TreeFam:
Gene Tree for LINC01832 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC01832

No data available for Orthologs for LINC01832 Gene

Paralogs for LINC01832 Gene

No data available for Paralogs for LINC01832 Gene

Variants for LINC01832 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01832 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01832 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01832
Leiden Open Variation Database (LOVD)
LINC01832

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01832 Gene

Disorders for LINC01832 Gene

Additional Disease Information for LINC01832

No disorders were found for LINC01832 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01832 Gene

Publications for LINC01832 Gene

No publications were found for LINC01832 Gene.

No data available for Mastermind for LINC01832 Gene

Products for LINC01832 Gene

Sources for LINC01832 Gene