Aliases for LINC01831 Gene

Subcategory (RNA class) for LINC01831 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01831 Gene

  • Long Intergenic Non-Protein Coding RNA 1831 2 3 5
  • LINC01831 2 168
  • HSALNG0017514 167
  • NONHSAG028794 92

External Ids for LINC01831 Gene

Summaries for LINC01831 Gene

GeneCards Summary for LINC01831 Gene

LINC01831 (Long Intergenic Non-Protein Coding RNA 1831) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01831 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01831 Gene

Genomics for LINC01831 Gene

GeneHancer (GH) Regulatory Elements for LINC01831 Gene

Promoters and enhancers for LINC01831 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J104414 Enhancer 0.6 Ensembl 500.7 -0.2 -206 0.4 JUND BCL6 RAD21 RXRA MAX KAT2B HNF4A REST FOXA1 YY1 LINC01831 ENSG00000227157 ENSG00000287793
GH02J104427 Enhancer 1.2 VISTA Ensembl CraniofacialAtlas dbSUPER 5.3 -15.2 -15244 3.2 EP300 FOXA2 CTCF CBX2 RAD21 POLR2A YY1 EZH2 LINC01102 LINC01831 ENSG00000287793
GH02J104433 Promoter/Enhancer 0.6 Ensembl dbSUPER 5.9 -19.4 -19406 0.4 CTCF LINC01831 LINC01102 lnc-POU3F3-14
GH02J104426 Enhancer 0.2 dbSUPER 5 -12.9 -12934 1.1 LINC01831 ENSG00000287793 LINC01102
GH02J104416 Enhancer 1.2 VISTA UCNEbase Ensembl dbSUPER 0.7 -2.2 -2206 3.2 CEBPB NANOG LINC01831 ENSG00000227157 ENSG00000287793
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01831 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01831 Gene

Genomic Locations for LINC01831 Gene
chr2:104,412,083-104,414,195
(GRCh38/hg38)
Size:
2,113 bases
Orientation:
Minus strand
chr2:105,028,685-105,030,466
(GRCh37/hg19)
Size:
1,782 bases
Orientation:
Minus strand

Genomic View for LINC01831 Gene

Genes around LINC01831 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01831 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01831 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01831 Gene

Proteins for LINC01831 Gene

Post-translational modifications for LINC01831 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01831 Gene

Domains & Families for LINC01831 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01831 Gene

Function for LINC01831 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01831 Gene

Localization for LINC01831 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01831 Gene

Pathways & Interactions for LINC01831 Gene

PathCards logo

SuperPathways for LINC01831 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01831 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01831 Gene

Drugs & Compounds for LINC01831 Gene

No Compound Related Data Available

Transcripts for LINC01831 Gene

mRNA/cDNA for LINC01831 Gene

7 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
2 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01831 Gene

No ASD Table

Relevant External Links for LINC01831 Gene

GeneLoc Exon Structure for
LINC01831

Expression for LINC01831 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01831

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01831 Gene

Orthologs for LINC01831 Gene

Evolution for LINC01831 Gene

ENSEMBL:
Gene Tree for LINC01831 (if available)
TreeFam:
Gene Tree for LINC01831 (if available)

No data available for Orthologs for LINC01831 Gene

Paralogs for LINC01831 Gene

No data available for Paralogs for LINC01831 Gene

Variants for LINC01831 Gene

Additional dbSNP identifiers (rs#s) for LINC01831 Gene

Additional Variant Information for LINC01831 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01831

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01831 Gene

Disorders for LINC01831 Gene

Additional Disease Information for LINC01831

No disorders were found for LINC01831 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01831 Gene

Publications for LINC01831 Gene

No publications were found for LINC01831 Gene.

Products for LINC01831 Gene

Sources for LINC01831 Gene