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Aliases for LINC01807 Gene

Subcategory (RNA class) for LINC01807 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC01807 Gene

  • Long Intergenic Non-Protein Coding RNA 1807 2 3 5

External Ids for LINC01807 Gene

Summaries for LINC01807 Gene

GeneCards Summary for LINC01807 Gene

LINC01807 (Long Intergenic Non-Protein Coding RNA 1807) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01807 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01807 Gene

Genomics for LINC01807 Gene

GeneHancer (GH) Regulatory Elements for LINC01807 Gene

Promoters and enhancers for LINC01807 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I228687 Enhancer 0.7 ENCODE 0.2 +56.3 56264 1.1 FOXA2 RXRA HLF MAX CEBPB CEBPG ZNF644 RAD21 FOXA1 ATF4 LOC105373920 SPHKAP ENSG00000228226 LINC01807
GH02I228731 Enhancer 0.2 ENCODE 0.4 +13.0 12961 0.2 GC02M228735 LINC01807 LOC105373919
GH02I228689 Enhancer 0.4 ENCODE 0.2 +55.4 55411 0.2 CTCF RAD21 LOC105373920 ENSG00000228226 LINC01807
GH02I228674 Enhancer 0.3 ENCODE 0.2 +69.3 69338 1.1 RCOR1 ENSG00000228226 GC02M228605 LINC01807
GH02I228612 Enhancer 0.6 ENCODE 0.1 +131.2 131227 1.6 FOXA2 JUNB CEBPB BATF EP300 ATF2 IRF4 JUND BCL11A ATF7 GC02M228589 GC02M228605 GC02P228591 LINC01807
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01807 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01807 Gene

Genomic Locations for LINC01807 Gene
269,518 bases
Minus strand

Genomic View for LINC01807 Gene

Genes around LINC01807 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01807 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01807 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01807 Gene

Proteins for LINC01807 Gene

Post-translational modifications for LINC01807 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01807 Gene

Domains & Families for LINC01807 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01807 Gene

Function for LINC01807 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01807 Gene

Localization for LINC01807 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01807 Gene

Pathways & Interactions for LINC01807 Gene

SuperPathways for LINC01807 Gene

No Data Available

Interacting Proteins for LINC01807 Gene

Gene Ontology (GO) - Biological Process for LINC01807 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC01807 Gene

Drugs & Compounds for LINC01807 Gene

No Compound Related Data Available

Transcripts for LINC01807 Gene

mRNA/cDNA for LINC01807 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01807 Gene

No ASD Table

Relevant External Links for LINC01807 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC01807 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01807 Gene

Orthologs for LINC01807 Gene

Evolution for LINC01807 Gene

Gene Tree for LINC01807 (if available)
Gene Tree for LINC01807 (if available)

No data available for Orthologs for LINC01807 Gene

Paralogs for LINC01807 Gene

No data available for Paralogs for LINC01807 Gene

Variants for LINC01807 Gene

Sequence variations from dbSNP and Humsavar for LINC01807 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000003113 -- 228,487,020(-) C/T intron_variant
rs1000059763 -- 228,528,419(-) C/A genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant
rs1000072215 -- 228,508,822(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000078847 -- 228,550,090(-) T/C genic_upstream_transcript_variant, intron_variant
rs1000110846 -- 228,570,796(-) C/G genic_upstream_transcript_variant, intron_variant

Additional Variant Information for LINC01807 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01807 Gene

Disorders for LINC01807 Gene

No disorders were found for LINC01807 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01807 Gene

Publications for LINC01807 Gene

  1. Genome-wide association study of endometrial cancer in E2C2. (PMID: 24096698) De Vivo I … Kraft P (Human genetics 2014) 3 58
  2. Genome-wide joint meta-analysis of SNP and SNP-by-smoking interaction identifies novel loci for pulmonary function. (PMID: 23284291) Hancock DB … London SJ (PLoS genetics 2012) 3 58

Products for LINC01807 Gene

Sources for LINC01807 Gene

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