Aliases for LINC01803 Gene

Data sources for LINC01803 Gene:

RNA type for LINC01803 Gene

lncRNA

Aliases for LINC01803 Gene

External Ids for LINC01803 Gene

Previous GeneCards Identifiers for LINC01803 Gene

  • GC02M219908
  • GC02M219913

Summaries for LINC01803 Gene

GeneCards Summary for LINC01803 Gene

LINC01803 (Long Intergenic Non-Protein Coding RNA 1803) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01803 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01803 Gene

Genomics for LINC01803 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01803 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J219902 Enhancer 0.3 Ensembl CraniofacialAtlas 250.7 +1.9 1922 1.2 LINC01803 RF00994-555 HSALNG0022417-001 LINC02832 SLC4A3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01803 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01803 Gene

Latest Assembly
chr2:219,893,153-219,904,923
(GRCh38/hg38)
Size:
11,771 bases
Orientation:
Minus strand

Previous Assembly
chr2:220,768,772-220,769,610
(GRCh37/hg19 by Entrez Gene)
Size:
839 bases
Orientation:
Minus strand

chr2:220,768,772-220,769,610
(GRCh37/hg19 by Ensembl)
Size:
839 bases
Orientation:
Minus strand

Genomic View for LINC01803 Gene

Genes around LINC01803 on UCSC Golden Path with GeneCards custom track
LINC01803 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01803 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01803 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01803 Gene

Proteins for LINC01803 Gene

Post-translational modifications for LINC01803 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01803 Gene

Domains & Families for LINC01803 Gene

Gene Families for LINC01803 Gene

genes like me logo Genes that share domains with LINC01803: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01803 Gene

Function for LINC01803 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01803 Gene

Localization for LINC01803 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01803 Gene

Pathways & Interactions for LINC01803 Gene

PathCards logo

SuperPathways for LINC01803 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01803 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01803 Gene

Drugs & Compounds for LINC01803 Gene

No Compound Related Data Available

Transcripts for LINC01803 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01803 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000215BB1_9606 lncRNA 616 4

RefSeq: NR_146975,

LncBook: HSALNT0047585,

LNCipedia: LINC01803:3,

NONCODE: NONHSAT077074.2,

URS0000EF7274_9606 lncRNA 798 1

Ensembl: ENST00000438659 (view in UCSC) ,

URS00009B3BF3_9606 lncRNA 842 2

LncBook: HSALNT0047582,

NONCODE: NONHSAT186333.1,

URS00009BA417_9606 lncRNA 757 2

LncBook: HSALNT0047584,

NONCODE: NONHSAT186334.1,

URS0001BF89AD_9606 lncRNA 842 1

LncBook: HSALNT0047582,

LINC01803 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01803 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01803 Gene

No ASD Table

Relevant External Links for LINC01803 Gene

GeneLoc Exon Structure for
LINC01803

Expression for LINC01803 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01803 Gene

Orthologs for LINC01803 Gene

Evolution for LINC01803 Gene

ENSEMBL:
Gene Tree for LINC01803 (if available)
TreeFam:
Gene Tree for LINC01803 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC01803

No data available for Orthologs for LINC01803 Gene

Paralogs for LINC01803 Gene

No data available for Paralogs for LINC01803 Gene

Variants for LINC01803 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01803 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01803 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01803
Leiden Open Variation Database (LOVD)
LINC01803

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01803 Gene

Disorders for LINC01803 Gene

Additional Disease Information for LINC01803

No disorders were found for LINC01803 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01803 Gene

Publications for LINC01803 Gene

No publications were found for LINC01803 Gene.

Products for LINC01803 Gene

Sources for LINC01803 Gene