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Aliases for LINC01791 Gene

Subcategory (RNA class) for LINC01791 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01791 Gene

  • Long Intergenic Non-Protein Coding RNA 1791 2 3 5

External Ids for LINC01791 Gene

Previous GeneCards Identifiers for LINC01791 Gene

  • GC19U902300

Summaries for LINC01791 Gene

GeneCards Summary for LINC01791 Gene

LINC01791 (Long Intergenic Non-Protein Coding RNA 1791) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01791 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01791 Gene

Genomics for LINC01791 Gene

GeneHancer (GH) Regulatory Elements for LINC01791 Gene

Promoters and enhancers for LINC01791 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J031165 Enhancer 0.6 UCNEbase Ensembl 600.7 -1.5 -1515 3.2 LINC01791 GC19P031149 TSHZ3
GH19J031168 Enhancer 0.4 UCNEbase 600.7 +0.8 849 0.2 LINC01791 GC19P031251 TSHZ3
GH19J031213 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.3 +47.0 47008 2.3 ZNF384 ZSCAN21 SP7 CREB1 POLR2A ZEB2 ZNF629 ZNF692 NRF1 SP1 GC19P031251 LINC01791 TSHZ3
GH19J031160 Enhancer 0.6 Ensembl ENCODE 0.4 -6.9 -6907 1 ZNF121 ZIC2 ZSCAN4 LINC01791 GC19P031149 TSHZ3
GH19J031203 Enhancer 0.8 Ensembl 0.3 +36.5 36485 2 ZNF680 ZNF704 ZNF544 PRDM10 ZNF776 ZNF148 ZSCAN5C ZBTB10 ZNF491 ZNF138 LINC01791 GC19P031251 TSHZ3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01791 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01791 Gene

Genomic Locations for LINC01791 Gene
chr19:31,167,516-31,207,663
(GRCh38/hg38)
Size:
40,148 bases
Orientation:
Plus strand
chr19:31,658,422-31,698,569
(GRCh37/hg19)
Size:
40,148 bases
Orientation:
Plus strand

Genomic View for LINC01791 Gene

Genes around LINC01791 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01791 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01791 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01791 Gene

Proteins for LINC01791 Gene

Post-translational modifications for LINC01791 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01791 Gene

Domains & Families for LINC01791 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01791 Gene

Function for LINC01791 Gene

Phenotypes From GWAS Catalog for LINC01791 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01791 Gene

Localization for LINC01791 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01791 Gene

Pathways & Interactions for LINC01791 Gene

PathCards logo

SuperPathways for LINC01791 Gene

No Data Available

Interacting Proteins for LINC01791 Gene

Gene Ontology (GO) - Biological Process for LINC01791 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01791 Gene

Drugs & Compounds for LINC01791 Gene

No Compound Related Data Available

Transcripts for LINC01791 Gene

mRNA/cDNA for LINC01791 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01791 Gene

No ASD Table

Relevant External Links for LINC01791 Gene

GeneLoc Exon Structure for
LINC01791
ECgene alternative splicing isoforms for
LINC01791

Expression for LINC01791 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01791 Gene

Orthologs for LINC01791 Gene

Evolution for LINC01791 Gene

ENSEMBL:
Gene Tree for LINC01791 (if available)
TreeFam:
Gene Tree for LINC01791 (if available)

No data available for Orthologs for LINC01791 Gene

Paralogs for LINC01791 Gene

No data available for Paralogs for LINC01791 Gene

Variants for LINC01791 Gene

Sequence variations from dbSNP and Humsavar for LINC01791 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000011346 -- 31,206,368(+) G/T intron_variant
rs1000112974 -- 31,190,459(+) C/A/G intron_variant
rs1000127766 -- 31,203,180(+) T/G intron_variant
rs1000146172 -- 31,179,543(+) C/T intron_variant
rs1000159902 -- 31,199,186(+) A/G intron_variant

Additional Variant Information for LINC01791 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01791

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01791 Gene

Disorders for LINC01791 Gene

Additional Disease Information for LINC01791

No disorders were found for LINC01791 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01791 Gene

Publications for LINC01791 Gene

No publications were found for LINC01791 Gene.

No data available for External Links for LINC01791 Gene

Products for LINC01791 Gene

Sources for LINC01791 Gene

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