Aliases for LINC01785 Gene

Subcategory (RNA class) for LINC01785 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC01785 Gene

  • Long Intergenic Non-Protein Coding RNA 1785 2 3 5
  • LINC01785 2 170
  • NONHSAG025317 94
  • HSALNG0124987 169

External Ids for LINC01785 Gene

Previous GeneCards Identifiers for LINC01785 Gene

  • GC19M022814
  • GC19M022809
  • GC19M022616
  • GC19M022726

Summaries for LINC01785 Gene

GeneCards Summary for LINC01785 Gene

LINC01785 (Long Intergenic Non-Protein Coding RNA 1785) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01785 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01785 Gene

Genomics for LINC01785 Gene

GeneHancer (GH) Regulatory Elements for LINC01785 Gene

Promoters and enhancers for LINC01785 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J022622 Promoter 0.4 Ensembl 750.6 +0.8 770 0.8 CTCF LINC01785 ENSG00000268589 lnc-ZNF492-4 lnc-ZNF492-2 NONHSAG045689.2-002
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01785 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01785 Gene

Genomic Locations for LINC01785 Gene
chr19:22,615,289-22,623,971
(GRCh38/hg38)
Size:
8,683 bases
Orientation:
Minus strand
chr19:22,798,359-22,806,773
(GRCh37/hg19)
Size:
8,415 bases
Orientation:
Minus strand

Genomic View for LINC01785 Gene

Genes around LINC01785 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01785 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01785 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01785 Gene

Proteins for LINC01785 Gene

Post-translational modifications for LINC01785 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01785 Gene

Domains & Families for LINC01785 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01785 Gene

Function for LINC01785 Gene

Phenotypes From GWAS Catalog for LINC01785 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01785 Gene

Localization for LINC01785 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01785 Gene

Pathways & Interactions for LINC01785 Gene

PathCards logo

SuperPathways for LINC01785 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01785 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01785 Gene

Drugs & Compounds for LINC01785 Gene

No Compound Related Data Available

Transcripts for LINC01785 Gene

mRNA/cDNA for LINC01785 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNACentral transcripts :
(2) LncBook transcripts :
(1) NONCODE transcripts :
(4) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01785 Gene

No ASD Table

Relevant External Links for LINC01785 Gene

GeneLoc Exon Structure for
LINC01785
ECgene alternative splicing isoforms for
LINC01785

Expression for LINC01785 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01785 Gene

Orthologs for LINC01785 Gene

Evolution for LINC01785 Gene

ENSEMBL:
Gene Tree for LINC01785 (if available)
TreeFam:
Gene Tree for LINC01785 (if available)

No data available for Orthologs for LINC01785 Gene

Paralogs for LINC01785 Gene

No data available for Paralogs for LINC01785 Gene

Variants for LINC01785 Gene

Sequence variations from dbSNP and Humsavar for LINC01785 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000222487 -- 22,625,714(-) A/G upstream_transcript_variant
rs1000472988 -- 22,621,293(-) G/A intron_variant
rs1000517701 -- 22,624,860(-) C/A upstream_transcript_variant
rs1000995752 -- 22,620,072(-) T/C intron_variant
rs1001503705 -- 22,615,918(-) A/C non_coding_transcript_variant

Additional Variant Information for LINC01785 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01785

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01785 Gene

Disorders for LINC01785 Gene

Additional Disease Information for LINC01785

No disorders were found for LINC01785 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01785 Gene

Publications for LINC01785 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 56

No data available for External Links for LINC01785 Gene

Products for LINC01785 Gene

Sources for LINC01785 Gene