Aliases for LINC01779 Gene

Data sources for LINC01779 Gene:

Subcategory (RNA class) for LINC01779 Gene


Aliases for LINC01779 Gene

External Ids for LINC01779 Gene

Previous GeneCards Identifiers for LINC01779 Gene

  • GC01U905658

Summaries for LINC01779 Gene

GeneCards Summary for LINC01779 Gene

LINC01779 (Long Intergenic Non-Protein Coding RNA 1779) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01779 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01779 Gene

Genomics for LINC01779 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01779 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J116169 Promoter 0.5 EPDnew 250.7 0.0 -8 0.1 ZIC2 ELF3 LINC01779 piR-33735-003 MAB21L3 ATP1A1
GH01J116166 Promoter 0.5 Ensembl 250.7 +0.2 245 0.2 ZIC2 ELF3 LINC01779 HSALNG0006314 MAB21L3 ATP1A1
GH01J116165 Enhancer 0.3 ENCODE 250.7 +1.3 1266 0.5 SPI1 LINC01779 HSALNG0006314 MAB21L3 ATP1A1
GH01J116164 Enhancer 0.3 ENCODE 250.7 +0.7 719 0.2 SPI1 LINC01779 HSALNG0006314 MAB21L3 ATP1A1
GH01J116167 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas 0.7 +4.1 4102 1.7 TBP IKZF1 CTCF BHLHE40 ZIC2 REST HCFC1 VEZF1 IRF4 ZNF341 HSALNG0006314 LINC01779 MAB21L3 ATP1A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01779 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01779 Gene

Latest Assembly
5,745 bases
Plus strand

Previous Assembly
(GRCh37/hg19 by Ensembl)
1,958 bases
Plus strand

Genomic View for LINC01779 Gene

Genes around LINC01779 on UCSC Golden Path with GeneCards custom track
LINC01779 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01779 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01779 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01779 Gene

Proteins for LINC01779 Gene

Post-translational modifications for LINC01779 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01779 Gene

Domains & Families for LINC01779 Gene

Gene Families for LINC01779 Gene

genes like me logo Genes that share domains with LINC01779: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01779 Gene

Function for LINC01779 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01779 Gene

Localization for LINC01779 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01779 Gene

Pathways & Interactions for LINC01779 Gene

PathCards logo

SuperPathways for LINC01779 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01779 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01779 Gene

Drugs & Compounds for LINC01779 Gene

No Compound Related Data Available

Transcripts for LINC01779 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01779 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000052FFC0_9606 lncRNA 916 4

Ensembl: ENST00000426515 (view in UCSC) ,

LncBook: HSALNT0013194,

LNCipedia: LINC01779:3,


URS00009C123D_9606 lncRNA 914 2

LncBook: HSALNT0013195,


LINC01779 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01779 Gene

No ASD Table

Relevant External Links for LINC01779 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for LINC01779 Gene

Expression for LINC01779 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01779 Gene

Orthologs for LINC01779 Gene

Evolution for LINC01779 Gene

Gene Tree for LINC01779 (if available)
Gene Tree for LINC01779 (if available)

No data available for Orthologs for LINC01779 Gene

Paralogs for LINC01779 Gene

No data available for Paralogs for LINC01779 Gene

Variants for LINC01779 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01779 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01779 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01779 Gene

Disorders for LINC01779 Gene

No disorders were found for LINC01779 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01779 Gene

Publications for LINC01779 Gene

No publications were found for LINC01779 Gene.

No data available for Mastermind for LINC01779 Gene

Products for LINC01779 Gene

Sources for LINC01779 Gene