Aliases for LINC01775 Gene

Subcategory (RNA class) for LINC01775 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01775 Gene

  • Long Intergenic Non-Protein Coding RNA 1775 2 3 5
  • LINC01775 2 5 165
  • NONHSAG024439.2 91
  • HSALNG0123176 164

External Ids for LINC01775 Gene

Summaries for LINC01775 Gene

GeneCards Summary for LINC01775 Gene

LINC01775 (Long Intergenic Non-Protein Coding RNA 1775) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01775 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01775 Gene

Genomics for LINC01775 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01775 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J002461 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.2 -211 2.8 ZNF221 BRCA1 HNRNPL GATAD2A TEAD4 PRDM10 ZNF629 TFE3 SOX13 IKZF1 LINC01775 SF3A2 TCF3 LOC100288123 ZNF77 ZNF555 SPPL2B DOT1L TLE2 ENSG00000267283
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01775 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01775 Gene

Genomic Locations for LINC01775 Gene
chr19:2,458,935-2,462,185
(GRCh38/hg38)
Size:
3,251 bases
Orientation:
Minus strand
chr19:2,458,933-2,462,183
(GRCh37/hg19)
Size:
3,251 bases
Orientation:
Minus strand

Genomic View for LINC01775 Gene

Genes around LINC01775 on UCSC Golden Path with GeneCards custom track
LINC01775 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01775 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01775 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01775 Gene

Proteins for LINC01775 Gene

Post-translational modifications for LINC01775 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01775 Gene

Domains & Families for LINC01775 Gene

Gene Families for LINC01775 Gene

genes like me logo Genes that share domains with LINC01775: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01775 Gene

Function for LINC01775 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01775 Gene

Localization for LINC01775 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01775 Gene

Pathways & Interactions for LINC01775 Gene

PathCards logo

SuperPathways for LINC01775 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01775 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01775 Gene

Drugs & Compounds for LINC01775 Gene

No Compound Related Data Available

Transcripts for LINC01775 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01775 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004CB71D_9606 lncRNA 371 4

Ensembl: ENST00000587826 (view in UCSC) ,

LncBook: HSALNT0254439,

LNCipedia: LINC01775:7, LINC01775:8,

NONCODE: NONHSAT060444.2,

URS0000A76B36_9606 lncRNA 369 3

HGNC: 52565,

RefSeq: NR_134931,

LNCipedia: LINC01775:6,

URS0000D5DBB1_9606 lncRNA 1188 1

LNCipedia: LINC01775:10,

URS0000D5D5B9_9606 lncRNA 210 1

LNCipedia: LINC01775:9,

LINC01775 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01775 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01775 Gene

No ASD Table

Relevant External Links for LINC01775 Gene

GeneLoc Exon Structure for
LINC01775

Expression for LINC01775 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01775 Gene

Orthologs for LINC01775 Gene

Evolution for LINC01775 Gene

ENSEMBL:
Gene Tree for LINC01775 (if available)
TreeFam:
Gene Tree for LINC01775 (if available)

No data available for Orthologs for LINC01775 Gene

Paralogs for LINC01775 Gene

No data available for Paralogs for LINC01775 Gene

Variants for LINC01775 Gene

Additional dbSNP identifiers (rs#s) for LINC01775 Gene

Additional Variant Information for LINC01775 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01775

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01775 Gene

Disorders for LINC01775 Gene

No disorders were found for LINC01775 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01775 Gene

Publications for LINC01775 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for LINC01775 Gene

Sources for LINC01775 Gene