Aliases for LINC01770 Gene

Subcategory (RNA class) for LINC01770 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC01770 Gene

  • Long Intergenic Non-Protein Coding RNA 1770 2 3 5
  • LINC01770 2 170
  • HSALNG0000162 169
  • NONHSAG000111 94

External Ids for LINC01770 Gene

Previous GeneCards Identifiers for LINC01770 Gene

  • GC01M001431

Summaries for LINC01770 Gene

GeneCards Summary for LINC01770 Gene

LINC01770 (Long Intergenic Non-Protein Coding RNA 1770) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01770 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01770 Gene

Genomics for LINC01770 Gene

GeneHancer (GH) Regulatory Elements for LINC01770 Gene

Promoters and enhancers for LINC01770 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01770 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01770 Gene

Genomic Locations for LINC01770 Gene
chr1:1,428,122-1,434,574
(GRCh38/hg38)
Size:
6,453 bases
Orientation:
Minus strand
chr1:1,365,919-1,369,953
(GRCh37/hg19)
Size:
4,035 bases
Orientation:
Minus strand

Genomic View for LINC01770 Gene

Genes around LINC01770 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01770 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01770 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01770 Gene

Proteins for LINC01770 Gene

Post-translational modifications for LINC01770 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01770 Gene

Domains & Families for LINC01770 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01770 Gene

Function for LINC01770 Gene

Phenotypes From GWAS Catalog for LINC01770 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01770 Gene

Localization for LINC01770 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01770 Gene

Pathways & Interactions for LINC01770 Gene

PathCards logo

SuperPathways for LINC01770 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01770 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01770 Gene

Drugs & Compounds for LINC01770 Gene

No Compound Related Data Available

Transcripts for LINC01770 Gene

mRNA/cDNA for LINC01770 Gene

(3) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(10) RNACentral transcripts :
(9) LNCipedia transcripts :
(2) LncBook transcripts :
(7) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01770 Gene

No ASD Table

Relevant External Links for LINC01770 Gene

GeneLoc Exon Structure for
LINC01770
ECgene alternative splicing isoforms for
LINC01770

Expression for LINC01770 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01770 Gene

Orthologs for LINC01770 Gene

Evolution for LINC01770 Gene

ENSEMBL:
Gene Tree for LINC01770 (if available)
TreeFam:
Gene Tree for LINC01770 (if available)

No data available for Orthologs for LINC01770 Gene

Paralogs for LINC01770 Gene

No data available for Paralogs for LINC01770 Gene

Variants for LINC01770 Gene

Sequence variations from dbSNP and Humsavar for LINC01770 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000373339 -- 1,430,748(-) T/C intron_variant, non_coding_transcript_variant
rs1000600492 -- 1,433,594(-) C/G/T intron_variant
rs1000708901 -- 1,429,700(-) G/A downstream_transcript_variant
rs1000784823 -- 1,431,280(-) G/A intron_variant
rs1000862244 -- 1,432,274(-) C/T intron_variant

Additional Variant Information for LINC01770 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01770

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01770 Gene

Disorders for LINC01770 Gene

Additional Disease Information for LINC01770

No disorders were found for LINC01770 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01770 Gene

Publications for LINC01770 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 56

No data available for External Links for LINC01770 Gene

Products for LINC01770 Gene

Sources for LINC01770 Gene