Aliases for LINC01765 Gene

Data sources for LINC01765 Gene:

Subcategory (RNA class) for LINC01765 Gene

lncRNA

Aliases for LINC01765 Gene

External Ids for LINC01765 Gene

Summaries for LINC01765 Gene

GeneCards Summary for LINC01765 Gene

LINC01765 (Long Intergenic Non-Protein Coding RNA 1765) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01765 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01765 Gene

Genomics for LINC01765 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01765 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J115097 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 250.7 +0.9 850 4.3 SP1 BCL11A FEZF1 ZIC2 SIN3A IRF4 EBF1 MAX ASH2L ZNF24 LINC01765 TSHB TSPAN2 HSALNG0006261 NGF
GH01J115088 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -8.7 -8709 2.8 ZBTB10 CTCF ZIC2 SIN3A ZNF341 KLF9 SP2 KLF16 ZNF2 ZBTB48 TSPAN2 LINC01765 NGF
GH01J115112 Enhancer 0.6 Ensembl 0.4 +15.6 15576 3.4 CTCF ZIC2 REST TRIM22 SMC3 RAD21 RFX5 JUND MAFK ZNF143 HSALNG0006261 TSPAN2 TSHB LINC01765 NGF
GH01J115110 Enhancer 0.2 Ensembl 0.4 +12.6 12577 0.2 TSPAN2 HSALNG0006261 LINC01765 NGF
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01765 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01765 Gene

Latest Assembly
chr1:115,098,324-115,111,924
(GRCh38/hg38)
Size:
13,601 bases
Orientation:
Plus strand

Previous Assembly
chr1:115,642,293-115,645,279
(GRCh37/hg19 by Ensembl)
Size:
2,987 bases
Orientation:
Plus strand

Genomic View for LINC01765 Gene

Genes around LINC01765 on UCSC Golden Path with GeneCards custom track
LINC01765 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01765 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01765 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01765 Gene

Proteins for LINC01765 Gene

Post-translational modifications for LINC01765 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01765 Gene

Domains & Families for LINC01765 Gene

Gene Families for LINC01765 Gene

genes like me logo Genes that share domains with LINC01765: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01765 Gene

Function for LINC01765 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01765 Gene

Localization for LINC01765 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01765 Gene

Pathways & Interactions for LINC01765 Gene

PathCards logo

SuperPathways for LINC01765 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01765 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01765 Gene

Drugs & Compounds for LINC01765 Gene

No Compound Related Data Available

Transcripts for LINC01765 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01765 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000039C0DF_9606 lncRNA 491 4

Ensembl: ENST00000448680 (view in UCSC) ,

LncBook: HSALNT0013085,

LNCipedia: LINC01765:11,

NONCODE: NONHSAT005384.2,

URS00008B2577_9606 lncRNA 865 3

LncBook: HSALNT0013084,

LNCipedia: LINC01765:10,

NONCODE: NONHSAT005383.2,

URS0000D56E63_9606 lncRNA 9370 1

LNCipedia: LINC01765:8,

URS0001BCCF12_9606 lncRNA 863 1

LncBook: HSALNT0013084,

URS0001BDF605_9606 lncRNA 752 1

LncBook: HSALNT0013086,

LINC01765 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01765 Gene

No ASD Table

Relevant External Links for LINC01765 Gene

GeneLoc Exon Structure for
LINC01765

No data available for mRNA/cDNA for LINC01765 Gene

Expression for LINC01765 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01765

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01765 Gene

Orthologs for LINC01765 Gene

Evolution for LINC01765 Gene

ENSEMBL:
Gene Tree for LINC01765 (if available)
TreeFam:
Gene Tree for LINC01765 (if available)

No data available for Orthologs for LINC01765 Gene

Paralogs for LINC01765 Gene

No data available for Paralogs for LINC01765 Gene

Variants for LINC01765 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01765 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01765 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01765

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01765 Gene

Disorders for LINC01765 Gene

Additional Disease Information for LINC01765

Open Targets Platform
Open Targets Platform

No disorders were found for LINC01765 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01765 Gene

Publications for LINC01765 Gene

No publications were found for LINC01765 Gene.

No data available for Mastermind for LINC01765 Gene

Products for LINC01765 Gene

Sources for LINC01765 Gene