Aliases for LINC01762 Gene

Data sources for LINC01762 Gene:

Subcategory (RNA class) for LINC01762 Gene

lncRNA

Aliases for LINC01762 Gene

External Ids for LINC01762 Gene

Summaries for LINC01762 Gene

GeneCards Summary for LINC01762 Gene

LINC01762 (Long Intergenic Non-Protein Coding RNA 1762) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC01762 include Hereditary Hemorrhagic Telangiectasia.

Additional gene information for LINC01762 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01762 Gene

Genomics for LINC01762 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01762 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01762 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01762 Gene

Latest Assembly
chr1:116,423,723-116,478,881
(GRCh38/hg38)
Size:
55,159 bases
Orientation:
Minus strand

Previous Assembly
chr1:116,966,346-117,021,448
(GRCh37/hg19 by Entrez Gene)
Size:
55,103 bases
Orientation:
Minus strand

chr1:116,966,346-117,021,464
(GRCh37/hg19 by Ensembl)
Size:
55,119 bases
Orientation:
Minus strand

Genomic View for LINC01762 Gene

Genes around LINC01762 on UCSC Golden Path with GeneCards custom track
LINC01762 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01762 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01762 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01762 Gene

Proteins for LINC01762 Gene

Post-translational modifications for LINC01762 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01762 Gene

Domains & Families for LINC01762 Gene

Gene Families for LINC01762 Gene

genes like me logo Genes that share domains with LINC01762: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01762 Gene

Function for LINC01762 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01762 Gene

Localization for LINC01762 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01762 Gene

Pathways & Interactions for LINC01762 Gene

PathCards logo

SuperPathways for LINC01762 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01762 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01762 Gene

Drugs & Compounds for LINC01762 Gene

No Compound Related Data Available

Transcripts for LINC01762 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01762 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006107F1_9606 lncRNA 625 3

Ensembl: ENST00000443219 (view in UCSC) ,

LNCipedia: LINC01762:38,

NONCODE: NONHSAT005439.2,

URS000016ACBB_9606 lncRNA 440 3

Ensembl: ENST00000434879 (view in UCSC) ,

LNCipedia: LINC01762:39,

NONCODE: NONHSAT005441.2,

URS00007E4219_9606 lncRNA 472 2

RefSeq: NR_125972,

LNCipedia: LINC01762:40,

URS0000328D56_9606 lncRNA 464 2

Ensembl: ENST00000430316 (view in UCSC) ,

LNCipedia: LINC01762:44,

URS00001433C8_9606 lncRNA 454 2

Ensembl: ENST00000423907 (view in UCSC) ,

LNCipedia: LINC01762:42,

LINC01762 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01762 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01762 Gene

No ASD Table

Relevant External Links for LINC01762 Gene

GeneLoc Exon Structure for
LINC01762

Expression for LINC01762 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01762 Gene

Orthologs for LINC01762 Gene

Evolution for LINC01762 Gene

ENSEMBL:
Gene Tree for LINC01762 (if available)
TreeFam:
Gene Tree for LINC01762 (if available)

No data available for Orthologs for LINC01762 Gene

Paralogs for LINC01762 Gene

No data available for Paralogs for LINC01762 Gene

Variants for LINC01762 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01762 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01762 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01762

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01762 Gene

Disorders for LINC01762 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LINC01762 Gene - From: LNC

Disorder Aliases PubMed IDs
hereditary hemorrhagic telangiectasia
  • osler hemorrhagic telangiectasia syndrome
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for LINC01762

genes like me logo Genes that share disorders with LINC01762: view

No data available for UniProtKB/Swiss-Prot and Genatlas for LINC01762 Gene

Publications for LINC01762 Gene

  1. Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia. (PMID: 24603890) Tørring PM … Brusgaard K (PloS one 2014) 74

Products for LINC01762 Gene

Sources for LINC01762 Gene