Aliases for LINC01758 Gene

Subcategory (RNA class) for LINC01758 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01758 Gene

  • Long Intergenic Non-Protein Coding RNA 1758 2 3 5
  • LINC01758 2 5 165
  • NONHSAG001782.2 91
  • HSALNG0004345 164

External Ids for LINC01758 Gene

Summaries for LINC01758 Gene

GeneCards Summary for LINC01758 Gene

LINC01758 (Long Intergenic Non-Protein Coding RNA 1758) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01758 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01758 Gene

Genomics for LINC01758 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01758 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J069432 Enhancer 0.2 Ensembl 600.7 -0.3 -250 0.6 LINC01758 HSALNG0004348 LRRC7 DEPDC1
GH01J069450 Enhancer 0.2 Ensembl 0.4 +17.9 17850 0.4 LOC105378789 LINC01758 LRRC7 DEPDC1
GH01J069400 Enhancer 0.2 Ensembl 0.3 -32.4 -32350 0.4 HSALNG0004348 LINC01758 LRRC7 DEPDC1
GH01J069397 Enhancer 0.2 Ensembl 0.3 -35.3 -35250 0.2 HSALNG0004348 LINC01758 LRRC7 DEPDC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01758 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01758 Gene

Genomic Locations for LINC01758 Gene
chr1:69,433,151-69,435,409
(GRCh38/hg38)
Size:
2,259 bases
Orientation:
Plus strand
chr1:69,898,938-69,901,092
(GRCh37/hg19)
Size:
2,155 bases
Orientation:
Plus strand

Genomic View for LINC01758 Gene

Genes around LINC01758 on UCSC Golden Path with GeneCards custom track
LINC01758 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01758 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01758 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01758 Gene

Proteins for LINC01758 Gene

Post-translational modifications for LINC01758 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01758 Gene

Domains & Families for LINC01758 Gene

Gene Families for LINC01758 Gene

genes like me logo Genes that share domains with LINC01758: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01758 Gene

Function for LINC01758 Gene

Phenotypes From GWAS Catalog for LINC01758 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01758 Gene

Localization for LINC01758 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01758 Gene

Pathways & Interactions for LINC01758 Gene

PathCards logo

SuperPathways for LINC01758 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01758 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01758 Gene

Drugs & Compounds for LINC01758 Gene

No Compound Related Data Available

Transcripts for LINC01758 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01758 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003A24DA_9606 lncRNA 458 5

HGNC: 52547,

RefSeq: NR_147164,

Ensembl: ENST00000448001 (view in UCSC) ,

LNCipedia: LINC01758:5,

NONCODE: NONHSAT003836.2,

URS00008BFBA8_9606 lncRNA 563 3

LncBook: HSALNT0008624,

LNCipedia: LINC01758:4,

NONCODE: NONHSAT003835.2,

LINC01758 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01758 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01758 Gene

No ASD Table

Relevant External Links for LINC01758 Gene

GeneLoc Exon Structure for
LINC01758

Expression for LINC01758 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01758 Gene

Orthologs for LINC01758 Gene

Evolution for LINC01758 Gene

ENSEMBL:
Gene Tree for LINC01758 (if available)
TreeFam:
Gene Tree for LINC01758 (if available)

No data available for Orthologs for LINC01758 Gene

Paralogs for LINC01758 Gene

No data available for Paralogs for LINC01758 Gene

Variants for LINC01758 Gene

Additional dbSNP identifiers (rs#s) for LINC01758 Gene

Additional Variant Information for LINC01758 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01758

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01758 Gene

Disorders for LINC01758 Gene

Additional Disease Information for LINC01758

No disorders were found for LINC01758 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01758 Gene

Publications for LINC01758 Gene

No publications were found for LINC01758 Gene.

No data available for Mastermind for LINC01758 Gene

Products for LINC01758 Gene

Sources for LINC01758 Gene