Aliases for LINC01745 Gene

Subcategory (RNA class) for LINC01745 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01745 Gene

  • Long Intergenic Non-Protein Coding RNA 1745 2 3 5
  • LINC01745 2 5 165
  • NONHSAG004645.2 91
  • HSALNG0011511 164
  • Lnc-MAP10-5 165

External Ids for LINC01745 Gene

Summaries for LINC01745 Gene

GeneCards Summary for LINC01745 Gene

LINC01745 (Long Intergenic Non-Protein Coding RNA 1745) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01745 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01745 Gene

Genomics for LINC01745 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01745 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J232709 Enhancer 0.6 Ensembl 0.7 -3.3 -3311 1.2 ZNF316 MAFF MAFK JUND HNF4A RXRA JUN MAX FOS ATF3 HSALNG0011510 LINC01745 SIPA1L2 MAP10
GH01J232718 Enhancer 0.6 Ensembl 0.4 +6.6 6589 2.6 ZNF629 ZNF501 SCRT2 CEBPB ZBTB17 SCRT1 ZNF189 ZNF335 SPI1 ZNF366 piR-30791-007 LINC01745 LOC107983960 MAP10 SIPA1L2
GH01J232726 Enhancer 0.5 Ensembl 0.4 +13.4 13388 1.4 PRDM10 ZBTB17 KLF13 GATA3 KLF14 RNU6-1211P MAP10 LOC107983960 piR-30791-007 LINC01745 SIPA1L2
GH01J232729 Enhancer 0.2 Ensembl 0.4 +16.2 16189 0.2 RNU6-1211P MAP10 LOC107983960 piR-30791-007 LINC01745 LINC01744 SIPA1L2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01745 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01745 Gene

Genomic Locations for LINC01745 Gene
chr1:232,712,912-232,747,745
(GRCh38/hg38)
Size:
34,834 bases
Orientation:
Plus strand
chr1:232,853,817-232,857,996
(GRCh37/hg19)
Size:
4,180 bases
Orientation:
Plus strand

Genomic View for LINC01745 Gene

Genes around LINC01745 on UCSC Golden Path with GeneCards custom track
LINC01745 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01745 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01745 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01745 Gene

Proteins for LINC01745 Gene

Post-translational modifications for LINC01745 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01745 Gene

Domains & Families for LINC01745 Gene

Gene Families for LINC01745 Gene

genes like me logo Genes that share domains with LINC01745: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01745 Gene

Function for LINC01745 Gene

Phenotypes From GWAS Catalog for LINC01745 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01745 Gene

Localization for LINC01745 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01745 Gene

Pathways & Interactions for LINC01745 Gene

PathCards logo

SuperPathways for LINC01745 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01745 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01745 Gene

Drugs & Compounds for LINC01745 Gene

No Compound Related Data Available

Transcripts for LINC01745 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01745 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005D0531_9606 lncRNA 372 6

HGNC: 52533,

RefSeq: NR_146922,

Ensembl: ENST00000430921 (view in UCSC) ,

LncBook: HSALNT0023918,

LNCipedia: LINC01745:8,

NONCODE: NONHSAT010221.2,

URS00008B891E_9606 lncRNA 1373 3

LncBook: HSALNT0023915,

LNCipedia: lnc-MAP10-5:1,

NONCODE: NONHSAT150746.1,

URS00008B92BE_9606 lncRNA 933 3

LncBook: HSALNT0023928,

LNCipedia: lnc-MAP10-5:4,

NONCODE: NONHSAT150750.1,

URS00008B7DC3_9606 lncRNA 508 3

LncBook: HSALNT0023916,

LNCipedia: LINC01745:6,

NONCODE: NONHSAT010219.2,

URS00008B58E9_9606 lncRNA 421 3

LncBook: HSALNT0023921,

LNCipedia: lnc-MAP10-5:3,

NONCODE: NONHSAT150749.1,

LINC01745 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01745 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01745 Gene

No ASD Table

Relevant External Links for LINC01745 Gene

GeneLoc Exon Structure for
LINC01745

Expression for LINC01745 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01745

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01745 Gene

Orthologs for LINC01745 Gene

Evolution for LINC01745 Gene

ENSEMBL:
Gene Tree for LINC01745 (if available)
TreeFam:
Gene Tree for LINC01745 (if available)

No data available for Orthologs for LINC01745 Gene

Paralogs for LINC01745 Gene

No data available for Paralogs for LINC01745 Gene

Variants for LINC01745 Gene

Additional dbSNP identifiers (rs#s) for LINC01745 Gene

Additional Variant Information for LINC01745 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01745

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01745 Gene

Disorders for LINC01745 Gene

Additional Disease Information for LINC01745

No disorders were found for LINC01745 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01745 Gene

Publications for LINC01745 Gene

No publications were found for LINC01745 Gene.

No data available for Mastermind for LINC01745 Gene

Products for LINC01745 Gene

Sources for LINC01745 Gene