Aliases for LINC01743 Gene

Subcategory (RNA class) for LINC01743 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01743 Gene

  • Long Intergenic Non-Protein Coding RNA 1743 2 3 5
  • LINC01743 2 168
  • NONHSAG004891 92
  • HSALNG0012183 167

External Ids for LINC01743 Gene

Summaries for LINC01743 Gene

GeneCards Summary for LINC01743 Gene

LINC01743 (Long Intergenic Non-Protein Coding RNA 1743) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01743 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01743 Gene

Genomics for LINC01743 Gene

Genomic Locations for LINC01743 Gene

Genomic Locations for LINC01743 Gene
chr1:246,516,039-246,524,287
(GRCh38/hg38)
Size:
8,249 bases
Orientation:
Minus strand
chr1:246,679,341-246,687,589
(GRCh37/hg19)
Size:
8,249 bases
Orientation:
Minus strand

Genomic View for LINC01743 Gene

Genes around LINC01743 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01743 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01743 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01743 Gene

No data available for GeneHancer (GH) Regulatory Elements for LINC01743 Gene

Proteins for LINC01743 Gene

Post-translational modifications for LINC01743 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01743 Gene

Domains & Families for LINC01743 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01743 Gene

Function for LINC01743 Gene

Phenotypes From GWAS Catalog for LINC01743 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01743 Gene

Localization for LINC01743 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01743 Gene

Pathways & Interactions for LINC01743 Gene

PathCards logo

SuperPathways for LINC01743 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01743 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01743 Gene

Drugs & Compounds for LINC01743 Gene

No Compound Related Data Available

Transcripts for LINC01743 Gene

mRNA/cDNA for LINC01743 Gene

2 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01743 Gene

No ASD Table

Relevant External Links for LINC01743 Gene

GeneLoc Exon Structure for
LINC01743

Expression for LINC01743 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01743

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01743 Gene

Orthologs for LINC01743 Gene

Evolution for LINC01743 Gene

ENSEMBL:
Gene Tree for LINC01743 (if available)
TreeFam:
Gene Tree for LINC01743 (if available)

No data available for Orthologs for LINC01743 Gene

Paralogs for LINC01743 Gene

No data available for Paralogs for LINC01743 Gene

Variants for LINC01743 Gene

Additional dbSNP identifiers (rs#s) for LINC01743 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01743 Gene

Variant ID Type Subtype PubMed ID
dgv60e201 CNV deletion 23290073
dgv886n54 CNV loss 21841781
dgv887n54 CNV loss 21841781
esv1237155 CNV deletion 17803354
esv1568202 CNV deletion 17803354
esv1722014 CNV insertion 17803354
esv26011 CNV loss 19812545
esv2727451 CNV deletion 23290073
esv2727462 CNV deletion 23290073
esv2727474 CNV deletion 23290073
esv2727485 CNV deletion 23290073
esv2740830 CNV deletion 23290073
esv2759012 CNV gain 17122850
esv2762191 CNV gain 21179565
esv3550155 CNV deletion 23714750
nsv1005825 CNV gain 25217958
nsv1010453 CNV gain 25217958
nsv1068645 CNV deletion 25765185
nsv1142796 CNV deletion 24896259
nsv428346 CNV gain 18775914
nsv522303 CNV loss 19592680
nsv525447 CNV gain 19592680
nsv549528 CNV gain 21841781
nsv549531 CNV gain 21841781
nsv549535 CNV loss 21841781
nsv549537 CNV loss 21841781
nsv549541 CNV loss 21841781
nsv549542 CNV loss 21841781
nsv549543 CNV loss 21841781
nsv9036 CNV loss 18304495
nsv945428 CNV duplication 23825009
nsv954015 CNV deletion 24416366

Additional Variant Information for LINC01743 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01743

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01743 Gene

Disorders for LINC01743 Gene

Additional Disease Information for LINC01743

No disorders were found for LINC01743 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01743 Gene

Publications for LINC01743 Gene

  1. A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene. (PMID: 19490893) Luo J … Elledge SJ (Cell 2009) 3 54

No data available for Mastermind for LINC01743 Gene

Products for LINC01743 Gene

Sources for LINC01743 Gene