Aliases for LINC01731 Gene

Subcategory (RNA class) for LINC01731 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01731 Gene

  • Long Intergenic Non-Protein Coding RNA 1731 2 3 5
  • LINC01731 2 168
  • HSALNG0006856 167
  • NONHSAG002758 92

External Ids for LINC01731 Gene

Summaries for LINC01731 Gene

GeneCards Summary for LINC01731 Gene

LINC01731 (Long Intergenic Non-Protein Coding RNA 1731) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01731 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01731 Gene

Genomics for LINC01731 Gene

GeneHancer (GH) Regulatory Elements for LINC01731 Gene

Promoters and enhancers for LINC01731 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J148277 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 500.7 +1.8 1841 4.6 CTCF TARDBP ZNF341 ZNF148 NEUROD1 ZBTB17 CEBPG FOS CEBPB ZNF592 LINC02806 LINC01731 TRH-GTG1-3 lnc-GPR89B-11 piR-44984-002 ENSG00000225871 GPR89B
GH01J148262 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas 5.2 +17.3 17263 3 ZNF217 NRF1 TCF12 POLR2G GTF2E2 TEAD4 ZNF639 ZNF10 ZBTB5 ZIC2 AB330775-004 ENSG00000199879 RNVU1-22-001 TRQ-CTG4-1 lnc-NBPF11-8 GPR89B ENSG00000225871 BCL9 ACP6 LINC01731
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01731 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01731 Gene

Genomic Locations for LINC01731 Gene
chr1:148,267,269-148,281,363
(GRCh38/hg38)
Size:
14,095 bases
Orientation:
Minus strand
chr1:147,744,014-147,752,855
(GRCh37/hg19)
Size:
8,842 bases
Orientation:
Minus strand

Genomic View for LINC01731 Gene

Genes around LINC01731 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01731 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01731 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01731 Gene

Proteins for LINC01731 Gene

Post-translational modifications for LINC01731 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01731 Gene

Domains & Families for LINC01731 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01731 Gene

Function for LINC01731 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01731 Gene

Localization for LINC01731 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01731 Gene

Pathways & Interactions for LINC01731 Gene

PathCards logo

SuperPathways for LINC01731 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01731 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01731 Gene

Drugs & Compounds for LINC01731 Gene

No Compound Related Data Available

Transcripts for LINC01731 Gene

mRNA/cDNA for LINC01731 Gene

3 RNACentral transcripts :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
3 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01731 Gene

No ASD Table

Relevant External Links for LINC01731 Gene

GeneLoc Exon Structure for
LINC01731

Expression for LINC01731 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01731

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01731 Gene

Orthologs for LINC01731 Gene

Evolution for LINC01731 Gene

ENSEMBL:
Gene Tree for LINC01731 (if available)
TreeFam:
Gene Tree for LINC01731 (if available)

No data available for Orthologs for LINC01731 Gene

Paralogs for LINC01731 Gene

No data available for Paralogs for LINC01731 Gene

Variants for LINC01731 Gene

Additional dbSNP identifiers (rs#s) for LINC01731 Gene

Additional Variant Information for LINC01731 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01731

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01731 Gene

Disorders for LINC01731 Gene

Additional Disease Information for LINC01731

No disorders were found for LINC01731 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01731 Gene

Publications for LINC01731 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LINC01731 Gene

Products for LINC01731 Gene

Sources for LINC01731 Gene